Nicotiana sylvestris (wood tobacco): 104246573
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Entry
104246573 CDS
T05026
Name
(RefSeq) chaperonin CPN60-2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104246573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsy03019
]
104246573
03110 Chaperones and folding catalysts [BR:
nsy03110
]
104246573
03029 Mitochondrial biogenesis [BR:
nsy03029
]
104246573
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nsy04147
]
104246573
Enzymes [BR:
nsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
104246573
Messenger RNA biogenesis [BR:
nsy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
104246573
Chaperones and folding catalysts [BR:
nsy03110
]
Heat shock proteins
HSP60 / Chaperonin
104246573
Mitochondrial biogenesis [BR:
nsy03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
104246573
Exosome [BR:
nsy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104246573
Exosomal proteins of other body fluids (saliva and urine)
104246573
Exosomal proteins of breast cancer cells
104246573
Exosomal proteins of colorectal cancer cells
104246573
Exosomal proteins of bladder cancer cells
104246573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Flavoprotein
Motif
Other DBs
NCBI-GeneID:
104246573
NCBI-ProteinID:
XP_009800688
UniProt:
A0A1U7YC33
LinkDB
All DBs
Position
1:35317077..35323227
Genome browser
AA seq
575 aa
AA seq
DB search
MYRFAASLASKARVARTSTQQIGGRLNWSRNYAAKDIRFGVEARAMMLQGVEELADAVKV
TMGPKGRNVVIEQSWGAPKVTKDGVTVAKSVEFKDKIKNVGASLVKQVANATNDVAGDGT
TCATVLTRAIFAEGCKSVAAGMNAMDLRRGITMAVDSVVTNLKSRARMISTSEEIAQVGT
ISANGEREIGELIAKAMERVGKEGVITIQDGKTLFNELEVVEGMKLDRGYISPYFITNQK
NQKCELDDPLILIHEKKISSVNAVVKALELALKRQRPLLIVAEDVDSEALATLILNKLRA
GIKVCAIKAPGFGENRKANLQDLAILTGGQVVTEELGLNIENVELEMLGSCKKVAISKDD
TVILDGAGEKKSIEERCEQIRSTIELSTSDYDKEKLQERLAKISGGVAVLKIGGASEAEV
GEKKDRVTDALNATKAAVEEGIVPGGGVALLYAAKELDKLETANFDQKIGVQIIQNALKT
PVHTIASNAGVEGAVVVGKLLEQDDTDLGYDAAKGEYVDMVKAGIIDPLKVIRTALVDAA
SVSSLLTTTEAVVVELPKDEKETPAMGGGMGGMDY
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgttttgcagcaagtcttgcttccaaagccagagttgcaagaaccagcacccaa
cagattggcggaaggttaaattggagtagaaattatgctgcaaaggatattagatttgga
gttgaagctcgggctatgatgcttcaaggtgttgaggaacttgctgatgctgttaaagtc
actatgggtccaaagggacgtaatgtggtgattgaacaaagttggggtgcacccaaagta
acaaaagatggtgtcactgtcgcaaaaagtgttgagttcaaggacaaaataaaaaatgtt
ggtgcaagcctcgtaaaacaagttgccaatgccacaaatgatgttgctggtgatggtacc
acgtgtgctacagtcctcacccgagcaatatttgctgaaggatgcaagtcagtggcagct
ggtatgaatgcaatggaccttagacggggtatcaccatggccgtagattccgttgtaaca
aacctgaaaagcagagcacggatgatcagcacatcagaggaaattgcacaggttgggact
atctctgcaaatggagaaagagaaattggtgagctaattgcaaaggctatggagagagta
ggcaaggagggagtcatcactattcaagatggaaagacactgttcaatgagttggaagtt
gttgaagggatgaagctggacagaggttacatctcaccatacttcatcacaaatcagaag
aatcagaaatgtgaactcgatgacccactaattcttattcatgagaaaaagatctcaagc
gttaatgctgtcgtgaaagcattagagttggctctgaagaggcaaaggcccctcttaatt
gtggctgaagatgtggacagtgaagcacttgccactcttattttgaacaagcttcgtgct
ggaatcaaggtttgtgccattaaagcaccaggctttggtgaaaacaggaaagctaatttg
caagatcttgctattttaactggaggccaagttgtaacagaagagcttggattgaacatt
gaaaatgtggagttggagatgctgggatcatgtaaaaaggtggctatttccaaggatgat
actgtcattcttgatggcgctggtgagaagaagtccatagaggaacgatgtgaacagatt
agatcaaccattgaacttagcacatctgattatgacaaggagaagttgcaggaaagacta
gctaagatttcaggaggtgttgctgtgttaaagatcggaggagctagtgaagctgaggtt
ggcgaaaagaaagatagagtcactgacgctttgaatgccacaaaggctgctgtggaggaa
ggaattgttccaggcggtggtgttgcacttctttatgcagcaaaggaattggataaatta
gaaactgccaactttgaccagaaaattggtgtacagattattcagaacgctcttaagaca
cctgtacatacaatagcttcaaatgcaggagtagagggggcagtcgtggttggtaaactg
ttggagcaggacgacactgatcttggatatgacgctgccaaaggtgaatatgtggatatg
gtcaaggcaggaatcattgacccgttgaaagtgatcaggacagccttggtcgatgctgcc
agcgtgtcgtctcttttgaccacaaccgaagcagttgttgtcgagcttcctaaggatgag
aaagaaactccagcaatgggtggcggcatgggtggcatggactactag
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