Nicotiana sylvestris (wood tobacco): 104246720
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Entry
104246720 CDS
T05026
Name
(RefSeq) LOW QUALITY PROTEIN: DNA topoisomerase 2-like
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nsy03032
]
104246720
03036 Chromosome and associated proteins [BR:
nsy03036
]
104246720
Enzymes [BR:
nsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
104246720
DNA replication proteins [BR:
nsy03032
]
Eukaryotic type
DNA Topoisomerases
104246720
Chromosome and associated proteins [BR:
nsy03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
104246720
Centrosome formation proteins
Centriole proteins
104246720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
Toprim
HATPase_c
Motif
Other DBs
NCBI-GeneID:
104246720
NCBI-ProteinID:
XP_070012541
LinkDB
All DBs
Position
9:116038784..116045721
Genome browser
AA seq
1474 aa
AA seq
DB search
MASKKLPLQSSSNANIATNGKTIEQTYQKKTQLEHILLRPDTYIGSVEKHTQTLWVWEND
KMTHRPVTYVPGLYKIFDEILVNAADNKQRDPKMDAVEVVIDPEQNFISVYNNGDGIPVE
IHQEEGVYVPELIFGHLLTSSNYDDAEKKTTGGRNGYGAKLTNIFSTEFVIETADGKRQK
KYKQVFSSNMGKKGEPIITKCKASENWTKVSFKPDLAKFNMEHLEEDVVALMRKRVIDLG
GCLGKTVKVKLNEQRIPVKSFEEYCKLFLDSTDAKREFLKVTDADGLLRWEICVSLSEGQ
FQQVSFVNSIATIKGGTHVDYVANQIANHIMGVVNKKNKNANIKAHAVKNHLWMFVNALI
DNPAFDSQTKETLTLRQSSFGSKCELQPDFLKKVEKNIGIVETLLSWADFKNSKDLKKTD
GKKSEKVKVEKLEDANDAGGRNSEKCTLILTEGDSAKALAMAGISVVGRDHYGVFPLRGK
LLNVREASHKQVSENKEIEAIKKILGLQTGKEYDSVKSLRYGHLMIMTDQDHDGSHIKGL
LINFIHTFWPSLLKVPSFLIEFITPIVKATHKSGKILSFYTMPEYESWRKSLGANSSGWS
IKYYKGLGTSTSKEGKEYFQDLQKHRKDFIWADNQDGESIELAFSKKKIEARKNWLRQFE
PGTHLDQKEKYISYTEFVNKELILFSMADLQRSIPSMLDGLKPGQRKILFCAFKRNFVKE
AKVSQFSGYVSEHSAYHHGEQSLSSTIIGMAQDYVGSNNVNLLQPNGQFGTRNMGGKDHA
SSRYIYTRLSPIARFLFPKEDDTILDYLNEDGQSIEPTWYVPIVPMVLINGSEGIGTGWS
SYVPNYNPRDLVANVRRLLNDEPMEPMDPWYKGFKGTIEKTATKEAGATYTVTGIIEELN
ETTLRISELPVRRWTEDYKQFLESMTVSNDKAKDPFIKEVRAYGDENSVCFEVILSEENL
ILAQQEGLLKKFKLATTISTSNMHLFDSKGKIKKYDNPEDILEEFYHVRLEYYEKRKRAL
LEILELELLRIENKVKFILGVVKGEIIVNNRKRADLLLELKEKGFTPFPKKKAVEAVVAD
TSDDAEDSEEELNRGVRAGDYDYLLSMAIGTLTLEKVQELCAERDKLNGEVEDMRNATPK
LLWLKDLDVLEKQLDEQDKIDIQTEEAREKIKKKVMNAAGLKAPKPKPRKNVKKASVVES
TAEPMDXVSCFNKGNRLVSNSNVTEVVKPKARGGSKKAPAKAKPIAVEDEEEEDDEVLAL
KDRLAAYNLNSSPDHSTEALETEAPKAQKKAPTRKAAAKKKTLPSIADVSEGEDEIEISD
DDEFEPEVAVGGKKKGGRKAAPAATKQPPKKRGPGNKQSVGIGQKLITSILKPAENTDNS
SPEKKVRKMRASPFNKKSGSVLGKNKEGSTSQENEDVSPVSSLGSLEDEVNEAVVAPKAR
VTRGKKTTYVISDSDNEPTDDSEFDGDDSDEDYD
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaaaaaactcccactccaatcaagcagcaatgccaacattgcaacaaacggc
aaaaccattgaacaaacctaccaaaagaaaactcaactcgaacacatccttcttcgacct
gatacctacatcggatccgttgaaaaacacacgcaaacactttgggtatgggaaaatgat
aagatgacccatcgtccggttacttatgtgcccggtttgtacaagatcttcgacgagatc
ttagtcaatgcggctgataacaaacaacgtgaccctaaaatggacgcagtggaagtggtg
atagatcccgaacagaatttcattagcgtctataataacggtgatggtattcctgtagag
atccatcaagaggaaggtgtttacgtgcctgaattgatttttgggcacttgttgactagt
agtaactatgatgatgctgagaagaagaccactggtggacgaaatggttacggtgctaag
cttacgaatattttttcgactgaatttgttattgaaactgctgatgggaagcgccagaag
aaatataagcaggttttctctagcaacatgggaaagaagggtgaaccaatcataacaaaa
tgcaaagcgagcgagaattggacaaaagtttcatttaagccagacctggcaaagtttaac
atggaacaccttgaagaagatgtagttgcgttaatgagaaagagagtgattgatttgggt
ggatgccttggaaagactgtgaaggtcaaactcaatgaacaacgcattcctgtcaaatca
tttgaagagtattgcaagcttttcttagattctactgatgcaaaaagggagttcctaaaa
gttacagatgcggacggattattaaggtgggagatatgtgtgagtttgagtgaagggcaa
tttcaacaggtcagttttgtaaacagcattgctacaatcaagggtggaactcatgttgat
tatgtggccaaccagatagcaaaccacataatgggtgtagtgaacaagaagaataaaaat
gctaacatcaaagcccacgcagtgaagaaccatttatggatgtttgttaatgctctcatt
gacaatcctgcttttgattcacaaactaaagaaaccttgactctgcgtcagagcagtttc
ggttcgaaatgtgaacttcaaccagattttctaaagaaagttgagaagaatattggcatt
gtggaaactctactctcctgggcagactttaagaatagcaaagaccttaagaagacagat
ggaaaaaaatctgagaaggtcaaagtggaaaagctagaagatgctaatgatgcaggaggg
aggaactccgagaaatgcacattgattttgactgaaggagattcagccaaggctcttgct
atggctggaatatctgttgttgggcgtgatcactatggcgtgttccctttgaggggtaaa
ctgctaaatgtaagggaagcaagtcataagcaggtttcagaaaataaagaaattgaggct
atcaagaagattcttggacttcagacaggcaaagaatatgacagcgtaaaatcactcaga
tatggtcatctaatgattatgacagatcaggatcatgatggttcacatatcaagggtctc
ttaattaatttcatccacactttttggccatccttgctgaaagttccatctttcttgatt
gagttcatcacaccaattgtgaaggctactcataaaagtgggaagatactgtcattttat
accatgcctgagtatgagtcgtggagaaagagtttgggtgctaattcaagcggttggtcg
attaagtactataaggggttgggaacaagtacttcaaaggaaggaaaagagtacttccaa
gatcttcagaaacacaggaaagattttatttgggcggataaccaagatggggaatcaata
gaacttgctttcagtaagaaaaagatagaagcaaggaagaattggcttaggcaatttgag
cctggtacccatctagaccaaaaagaaaagtacatctcatacactgagtttgttaacaaa
gagcttattctgttttcaatggccgatcttcaaaggtctattccatcaatgcttgatggt
ttgaaaccgggtcaaaggaagattctgttctgtgcgtttaagaggaactttgttaaggaa
gcaaaagtttcccaattttctggttatgtctctgagcactcagcttatcaccatggtgaa
cagagtcttagcagcaccatcattggcatggcacaggactatgttggcagtaataatgta
aatcttttgcaaccaaatggtcaatttggcactcgtaatatgggaggcaaagatcatgca
agctctaggtacatttacactcggctttcaccgattgcaagatttctgtttcccaaggag
gatgatacaattcttgattacttgaatgaagatggtcaatctattgaacctacttggtat
gtgccgatcgttccaatggtacttataaatggcagtgaaggtatagggacaggttggagt
tcatacgttccaaattataatccaagagaccttgttgctaatgtaaggcgtttgctgaat
gatgagcctatggaaccaatggatccatggtataaaggtttcaaaggaacaatagagaaa
acagcaacaaaagaagccggagctacctacactgtcactggtattatagaagagctcaat
gaaacgactcttaggatttctgagttgccagtccggaggtggacagaggattataagcag
tttctggagtccatgacagtctcaaatgacaaggccaaggatcccttcataaaggaagtc
agagcatatggtgatgagaactctgtatgttttgaagtgatcttgtctgaggagaatctg
attttagcccagcaagagggtttgcttaaaaagtttaagctggctactacaataagcacc
agcaatatgcaccttttcgactctaagggcaaaattaagaaatatgacaacccagaagac
atccttgaggagttctaccatgtaagactcgagtattatgagaaacgaaagagagctctg
ttggagattcttgaattggagttgctgcgaattgagaacaaggtgaaattcatccttgga
gttgtgaaaggagaaatcattgtgaataacaggaagagagctgatctattgcttgagttg
aaggagaaaggttttactcctttccccaagaaaaaggctgttgaagctgttgttgcagac
acaagtgatgatgcagaagatagcgaagaggagttaaacagaggagttagggcaggtgat
tatgactacttgctgtcgatggcaataggaacattgactcttgagaaggttcaagaactg
tgtgctgagagggataaactgaatggtgaggttgaagatatgagaaatgcaactccaaag
cttttgtggttgaaggatcttgatgtccttgagaaacagcttgatgaacaagacaaaatt
gatatccagacagaggaagctagagagaagataaagaagaaggtaatgaacgcagctggg
ttaaaggcaccgaagcctaaaccccgaaagaatgttaagaaggctagtgtagtggagtct
actgctgaaccaatggacngtgtcagttgcttcaacaaaggaaacaggttagtatctaat
tccaatgttactgaagttgtgaaaccaaaagccagaggaggttcgaagaaagctcctgca
aaggcaaaacctattgcagttgaagatgaagaagaagaagatgatgaggtgctagcgttg
aaagacagacttgcagcttacaatcttaactcttccccagatcactcaacagaagccctg
gagactgaagccccaaaagctcaaaagaaagcacctactagaaaagctgctgcaaaaaag
aagactctgccatccattgcagatgtttctgaaggtgaggatgagattgaaattagtgat
gatgatgagtttgagccagaagtagctgtgggagggaaaaagaaaggagggaggaaagca
gcaccagcagcaactaaacaacccccaaagaaaagaggaccaggtaataagcaatcagta
ggtattggtcagaaactcataacatcaattctgaagcctgcagagaatactgataatagc
tcacctgagaaaaaagtgaggaaaatgagggcatccccatttaacaagaaaagtggttct
gttctgggaaagaacaaggagggtagtacttcacaggaaaatgaagacgtgagtcctgtt
tcttctttgggcagtctagaggatgaagtcaatgaagctgttgtggctccaaaagctagg
gtaactcgtgggaagaagacaacatatgttatcagtgattctgataatgaacctactgat
gattctgagtttgatggagatgactctgatgaagattacgattag
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integrated database retrieval system
