Nicotiana sylvestris (wood tobacco): 104246813
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Entry
104246813 CDS
T05026
Name
(RefSeq) ubiquitin C-terminal hydrolase 12-like isoform X2
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
104246813
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nsy01002
]
104246813
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nsy04121
]
104246813
Enzymes [BR:
nsy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104246813
Peptidases and inhibitors [BR:
nsy01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104246813
Ubiquitin system [BR:
nsy04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104246813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
Nitroreductase
Motif
Other DBs
NCBI-GeneID:
104246813
NCBI-ProteinID:
XP_009801001
UniProt:
A0A1U7YGD6
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Position
12:108926168..108947544
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AA seq
1122 aa
AA seq
DB search
MTMLNPQPLDQQEEEEMLVPHSDLVEGPQPLVEGPQPMEVAPAENASTGESQAVDEPQAS
RFTWTIDNFSRLSVKKLYSEAFVVGSYKWRVLIFPKGNNVDCLSMYLDVADSSTLPYGWN
RYAQFSLAVVNQINPKYSVKKETQHQFNQRESDWGFTSFMLLSDLYDPNKGYLVNDKVVI
EADVAVRKVIDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTEN
DMPSGSIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLED
KMKGTVVEGTIQKLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKGCRDVYASFDKYVE
VERLEGDNKYHAEEHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPL
ELDLDRENGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDER
VTKEDLKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIICDVGE
KDIAEHLRIRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDLREQIGKEIYFDLVDHDKV
RSFRIQKQMPFNLFKEEVAKELGLPVQFQRFWIWAKRQNHTYRPNRPLTPQEELQTVGQL
REVSNKTNNAELKLFLEVDLGLDLVPSPPPDKSKDDILLFFKLYDPEKEELQYVGRLFVK
STSKPIEILPKLNELAGFAPDQEIDLFEEIKFEPSVMCERLDRKASFRFSQIEDGDIICF
QKKALPEVEEQVRFPDVPSYLEYVKNRQIVHFRALEKPKEDDFCLELAKSDTYDDVVERV
AQRLGVDDPSKIRLTPHNCYSQQPKPNPIKYRSVDHLVDMLIHYNQISDILYYEVLDIPL
PELQCLKTLKVAFHHSTKDEVEILNVRLPKQSTVGDVLNEIKSKVELSHPNAELRLLEVF
YHKIYKIFPLTEKIENINDQYWTLRAEEIPEGEKNLGPHDRLIHVYHFTKETPQNQMQVQ
NFGEPFFLVIHEGETLAEIKVRIQKKLQVPDEEFSKWKFAFLSLGRPEYLQDSDIVSSRF
QRRDVYGAWEQYLGLEHADNTSKRPYVSQNRHTFEKPVKIYN
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgctgaatcctcaaccgttggatcagcaggaagaagaggagatgcttgtgcca
cattctgacttagttgaaggtcctcagcccttagttgaagggcctcagcccatggaagtg
gcacctgctgagaatgctagtacgggggagagtcaagccgtagatgagccacaggcatcc
cggtttacttggacaattgacaatttctctcggttatctgtgaagaagctatattccgag
gcttttgttgttggtagttataaatggcgagtgcttatatttccaaaaggaaacaacgtg
gattgtttgtcaatgtatttagatgtggcagattcatctacattgccatatgggtggaac
agatatgcccagttcagcttagctgttgtaaatcaaataaaccccaaatattcagtgaaa
aaagagacgcaacaccagtttaaccaaagagagagtgactggggcttcacatctttcatg
cttctaagtgatctttatgaccccaataagggatatcttgtaaatgataaagttgttatt
gaagccgatgttgctgtacgaaaggtcattgattactggacatatgactcaaagaaggag
acaggatatgttgggcttaagaatcagggagctacttgttacatgaactctctcctacaa
accttgtaccatatcccctactttagaaaggctgtgtatcacatgccaactacagagaat
gacatgccatcggggagcatcccgttggctctgcaaagtttattttataagctccaatat
agtgataccagtgtggcgacaaaagaattgacaaaatcttttggatgggacacatatgat
tcattcatgcagcatgatgtgcaagaactaaacagagtgttgtgtgaaaagcttgaagac
aagatgaagggtacggttgtggaagggacaattcaaaagttatttgaggggcaccatatg
aattacatagaatgtatcaatgtggacttcaaatcaacgagaaaagagtcattttatgat
cttcaactcgacgtcaaaggctgtcgcgatgtttatgcctcttttgacaaatatgttgaa
gttgaacgtctagaaggcgataataagtaccatgctgaagaacatggtttgcaggatgca
aaaaaaggtgtactatttattgacttccctccagttctccagcttcagctaaaaagattt
gaatatgatttcatgcgagatacaatggttaagataaatgaccgttatgaatttcctcta
gaacttgaccttgatagggagaatggcaaatatttgtctcctgatgcagataggagcgtc
cggaatctctacacacttcatagtgtgttggttcatagtggtggtgtgcatggtggacac
tattatgctttcatcaggccaacactatcagatcaatggtataagtttgatgatgaacgg
gtgacaaaagaagacttgaagagggctctagaggaacaatatggtggagaggaggagttg
ccacagacaaatcctggcttcaataacactccctttaagtttacaaaatactccaacgcg
tacatgcttgtttatatacgtgagagtgacaaggataaaataatttgtgatgtcggtgag
aaagacattgcggaacacctaaggataaggttgaagaaagaacaagaagagaaggaggac
aagagacgatacaaagcacaggcccacctttatacaattatcaaggttgcacgtgatgag
gatcttagggagcagataggaaaggagatatattttgatcttgttgatcatgacaaagtt
cgtagctttcgaattcagaaacagatgccttttaaccttttcaaggaggaagttgcaaaa
gaattgggtctcccagttcaattccagcgtttctggatttgggcaaagcggcaaaatcac
acatatcggcccaatcgcccattaactccgcaggaggaactacaaaccgttggtcagtta
agggaagtttctaacaagaccaacaatgctgagttaaaattatttttggaagtggacctt
ggcctggatctcgttcctagtcctccacctgacaaaagtaaagatgatatactccttttc
tttaagctttatgatcctgagaaagaagagcttcaatatgttggtaggctttttgtgaag
agtactagtaagccaattgaaatacttccaaaactgaatgaattggctggatttgctcct
gaccaagaaattgacctttttgaggaaataaaatttgaaccttctgtcatgtgtgaaaga
ctagatagaaaggcttcatttcgatttagccagattgaagatggtgacattatatgcttt
caaaagaaagctttgcctgaagttgaagaacaagtccgatttccggatgttccttcatat
ctggaatatgtaaaaaatcgccagattgtccactttcgagcactggagaaaccgaaggag
gatgatttctgtctagagttagcaaaaagtgatacatatgatgatgtagtggagagagtg
gcgcaacggcttggtgtggatgatccctccaaaattaggcttactccacacaactgctac
tctcagcaacccaagcctaaccccatcaaatatcggtctgtggatcatttggtagacatg
ctaatccattacaatcagatttctgatatactttattacgaagttctggacattcctctg
ccagaattacaatgtctgaagacgctcaaagttgcttttcatcattctacgaaggatgag
gttgaaattttgaatgtaagattgcctaagcagagtaccgtgggggatgttcttaatgaa
atcaaatcaaaggtagagttgtcccatccaaatgcagagcttagattactcgaagtcttc
tatcacaagatttataagatctttccgctcactgaaaagattgagaatataaatgaccag
tattggacattgcgggcagaggagataccagagggggagaaaaatcttggtccccatgat
cgtctaattcatgtttaccatttcacgaaagagactccacaaaatcaaatgcaagtgcag
aattttggagaacctttctttctggtcatccatgaaggtgaaactttagcggagattaaa
gtgcgcattcaaaagaaattgcaggttccagatgaggagttttctaagtggaaatttgca
tttttatcattggggcgcccggaataccttcaggattcggacattgtatccagccgcttt
cagaggagagatgtttatggtgcttgggagcagtaccttggattggaacatgcagataat
acatctaagaggccatatgttagtcagaaccgccacacctttgaaaagccagtcaagata
tacaattga
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