Nicotiana sylvestris (wood tobacco): 104246887
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Entry
104246887 CDS
T05026
Name
(RefSeq) uncharacterized WD repeat-containing protein C17D11.16
KO
K14791
periodic tryptophan protein 1
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nsy03009
]
104246887
Ribosome biogenesis [BR:
nsy03009
]
Eukaryotic type
90S particles
Other 90S particles
104246887
Pre-60S particles
Other pre-60S particles
104246887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
ANAPC4_WD40
Beta-prop_EML
Beta-prop_TEP1_C
WD_LRWD1
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_HPS5
Beta-prop_IFT122_1st
MIOS_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Beta-prop_Nup120_160
Beta-prop_RSE1_2nd
Motif
Other DBs
NCBI-GeneID:
104246887
NCBI-ProteinID:
XP_009801085
UniProt:
A0A1U7YGL4
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All DBs
Position
2:complement(34193804..34200182)
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AA seq
494 aa
AA seq
DB search
MIAAISWVPKGVAKPVPAAAEPPSKEEIEELLKCGLLDKSEDSDNEEAEEDMNVDESKEN
EDDEVAVALAAANALGKATKDVSLGTDNITNGLKELNMENYDDEEDGIELFGSGLKDLYY
PSNDMDPYLKDKDNDSEEDEDMTIKPDDSIIVCASNDDDVSHLEIWILEVLSDGTVNMYV
HHEIIIPAFPLCTAWIDCPIKSDEGKGNFIAVGSMELAIEIWDLDILDEVQPAAVLGGIA
DIKKKGKKKTIKYKKDSHSDSVLGLAWNKEYRNMLASASADQSVKVWDVNTRSCTVTMND
HTDKVQAVAWNPFASQILLSGSFDHTVCMKDVRYPSHSGYKFPVSADVESLAWDPHSEHS
FVVSLENGTVTSFDIRAASSDSSSATKPSFTIHAHDKAVSSMSFNPLVPNLLATGSTDKM
VKLWDLSNNQPSCIASRNPKAGAVFSVSFSDDSPFFLAIGGSKGKLQLWDVSSEDAVLKK
YGKYVTQKGPLPKS
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagctatttcgtgggttcccaaaggggttgcaaagccagttccagctgcggct
gagcccccttcaaaggaagaaattgaggagcttttgaagtgtggcctccttgataaaagt
gaagatagtgataatgaggaagctgaagaagatatgaatgttgatgaatccaaggaaaac
gaggatgatgaagttgctgttgcattagcagctgctaatgcacttggaaaagccacaaaa
gatgtctctctaggaaccgataacataacaaatggtttaaaggaattgaatatggaaaac
tacgatgatgaggaggatggcattgagcttttcggttcgggactcaaagacttgtactac
ccaagtaatgacatggacccatatctcaaggataaggacaatgactcagaggaggatgag
gacatgacaataaagcctgatgattctattatagtttgtgcaagcaatgatgacgatgtc
agtcatcttgagatctggattttggaagttttatcagatggtactgtaaacatgtatgtt
catcatgagattattattcctgcgtttcctctctgcacagcatggatcgattgccctatt
aaaagtgacgaggggaaagggaacttcatagctgtgggctcaatggaactagcaattgaa
atttgggacctagacatattggatgaggtgcaaccagctgctgtattaggtggaatcgct
gacataaagaaaaaggggaagaagaaaaccatcaaatacaaaaaggatagccactccgat
tcagtacttggtctcgcttggaacaaggaatacaggaatatgcttgccagtgctagtgct
gatcaatcagtcaaggtttgggatgtgaataccagaagctgtactgtcactatgaacgac
catactgacaaggttcaagcagttgcatggaatccatttgcatcacagattctcctgagc
gggtcattcgatcatacagtttgcatgaaggatgtgaggtatccatctcacagtggatat
aagtttccagtttctgctgacgttgaaagcttggcttgggatccacattctgagcattca
tttgtggtcagcttggagaatggtacagttactagttttgatatccgtgctgctagttct
gattcgagttctgcgacaaagccaagtttcaccatccatgctcatgataaagcagtgtcc
tcgatgtcctttaatcctctagtcccgaatcttcttgcaactggttccacggacaagatg
gttaaactatgggatttgagcaacaatcaaccttcttgtattgcatcaaggaatccaaaa
gccggagctgtcttctcggtttccttctcagatgattcccccttttttcttgctattggt
ggttctaaagggaagttgcagctatgggatgtttcttcagaagatgcggtgttgaagaaa
tatgggaaatatgtcacgcaaaaagggccgttgcccaaatcataa
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