Nicotiana sylvestris (wood tobacco): 104246938
Help
Entry
104246938 CDS
T05026
Name
(RefSeq) lysine--tRNA ligase, chloroplastic/mitochondrial isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
104246938
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nsy01007
]
104246938
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nsy03016
]
104246938
Enzymes [BR:
nsy01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
104246938
Amino acid related enzymes [BR:
nsy01007
]
Aminoacyl-tRNA synthetase
Class II (A)
104246938
Transfer RNA biogenesis [BR:
nsy03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
104246938
Prokaryotic type
Other AARSs
104246938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DUF7187
Motif
Other DBs
NCBI-GeneID:
104246938
NCBI-ProteinID:
XP_009801152
UniProt:
A0A1U7YAK5
LinkDB
All DBs
Position
11:165641444..165662429
Genome browser
AA seq
592 aa
AA seq
DB search
MEALQPLKQLIHFASFRSHRFRPSSPFFIVRCCSSSSSSSSAATTAAVAGRAGGRNRRSN
SGTSTSTSDKEAIRAIRINKVEELRSNGLEPYAYKWDRTHTAGQLQEIYKNLGNGEESNS
ENDYVSVSGRIVARRAFGKLAFLTLRDDSGMIQLYCEKERLVDNQFEQLKTLVDVGDILG
ANGSIKRTEKGELSVCVNSFSILTKSLLPLPDKYHGLTDVDKRYRQRYVDMIANPEVVDT
FRKRAKIVSEIRKTVESFGFVEVETPVLQGAAGGAEARPFITYHNSLGRDLYLRIATELH
LKRMLVGGFEKVYEIGRIFRNEGISTRHNPEFTTIEMYEAYSDYESMMNMTEEMVTRCAL
AVNGKLIIDYQGVEICLERPWRRETMHNLVREATGIDFNNFGDDLKAAKEHTRKAIAILG
DDLDKGSIEACSSVGHLLNEVFEMIVEPKLLQPTFVLDYPIEISPLAKPHRRHSGLTERF
ELFICGRELANAFSELTDPVDQRRRLEEQVKQHNEKKAASGLNKAGSEGQENKDDNDDSY
EVTLDEDFLTALEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFPVLKIQQ
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggaagccctgcagccgttgaagcaacttatccactttgcttcttttaggtctcataga
tttcgaccctcttctcctttcttcattgttcgttgctgctcttcttcttcttcttcttct
tctgccgctactacagctgcagttgccggtagagccggcggccgcaaccgtaggtccaat
tccggcacttctacttcaacttcagataaagaggctattcgtgccatacgcatcaacaag
gtggaagagctgagaagcaatggcttggagccctatgcttacaagtgggatcggactcac
actgctggtcaactgcaagagatttataagaatttaggaaatggcgaagagtcgaatagt
gaaaatgattatgtttctgtctcaggaagaatagtcgctcgcagagcttttggaaagctc
gcctttttaactttaagagatgattctggcatgattcagctttattgtgagaaggaaagg
cttgtagataatcagtttgagcaattgaagacgcttgttgatgttggtgatatattgggg
gcaaatggttcaatcaagcgcacagagaaaggggagctatctgtatgtgtcaactcattc
tcgattctcacaaagtcattgcttccattgccggacaaatatcatggcttaacagatgta
gacaagcgctatcgacagaggtatgtagacatgattgcaaatcctgaggtggttgatacc
tttcgcaagagggcaaagattgtatcagaaatacgcaagacagtggaatcttttggcttt
gtggaagttgaaacacctgttctccagggagcagctggtggtgcagaagctaggccattt
attacatatcataattctcttggaagggatctctatttgagaattgcaacagagcttcat
ttgaagagaatgctggttgggggatttgaaaaagtttatgaaattggccgtatattccgc
aatgaaggcatttcaactcgacataatcctgaattcaccaccatagagatgtatgaagca
tactctgactatgaaagcatgatgaatatgacagaagaaatggtgacacgatgtgccctt
gcagttaatgggaaacttataattgattatcagggtgtggagatctgcttggaaagacct
tggaggagggagacaatgcataatcttgtgagagaagctaccgggattgattttaataac
tttggtgatgatcttaaagcagctaaagaacatactcgtaaagcgattgctattcttggt
gatgatctggataagggttcaattgaagcatgctcttctgttggccatttgcttaatgag
gtctttgagatgatagtagaaccaaagcttctacaaccgacttttgtcttggactatcct
attgaaatatctccactggccaaaccacatagaaggcattcaggcttaactgagagattc
gagctattcatttgtggtcgcgagctagcgaatgccttctcagaattaactgatcctgtg
gaccagagaagacgcttggaagagcaagtgaagcaacataatgagaagaaagcggcatca
ggtttaaataaggctggttcagagggacaagagaacaaagatgataatgatgactcgtat
gaagtaactcttgacgaagacttcctcacagctttggaatatggaatgcctccagcttct
ggaatgggacttggcattgacaggctagtaatgcttctgacaaactcagcaagcatccgc
gatgttattgctttcccagtcctcaagattcaacaatag
DBGET
integrated database retrieval system
