Nicotiana sylvestris (wood tobacco): 104247344
Help
Entry
104247344 CDS
T05026
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nsy03041
]
104247344
Spliceosome [BR:
nsy03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
104247344
Other components
Complex C specific factors
104247344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Mis12
Motif
Other DBs
NCBI-GeneID:
104247344
NCBI-ProteinID:
XP_009801630
UniProt:
A0A1U7YBX9
LinkDB
All DBs
Position
10:105012905..105019901
Genome browser
AA seq
860 aa
AA seq
DB search
MDDHQEMERFGMENDFEDGQWISGEFYYRKRKEKKRVQTKDDVLYGVFASDDSDSDYEGS
FKKRKKGLSTKADLTKPVNFVSTGTVMPDQEIDRNFKEEKNQKMSEESKGLGSGASVGLG
FGTSSSKNIAADGYTKTQAQIEIEEENFLPTAFGRMIKEGALRREKEREKEKSMLAKKSS
ESGRREPGGDVGGFEKHTKGIGMKLLEKMGYKGGGLGKNEQGILAPVEAKLRPKNMGMGF
NDYKETSAPTLQESEGKPVARPAQPVEGHSKEKLWSKQAKKLKKVYITAEELLAKKQEQG
LEVVQKVFDMRGPQVRVLTNLENLNAEDKARENDVPMPELQHNIRLIVDLAELDIQKIDS
DLRNERETVVALQKEKEKFQAEAARQKRQLDNMEEIVSVLDRIGEESTSGTLNLDSLAAA
FADLQQQYSEEYKLCNLSSIACSYAQPLFIRVFQGWDPLQTPTHGMEVVSRWKYLLQGDD
IFTISDAASPYTQIFMEVVFPAIRISGTNNWQARDPEPMLRFLESWEKLLPPVVLQTILE
NIVLPKLSAAVDSWDPRRETIPIHSWVHPWLPLLGQRLESCYHTIRNRLESVLHAWHPSD
MSAYYILSPWKTVFDTINWEKLMVRFIVPKLLNVMHEFQINPANQNLDQFYWVRTWATAI
PIHHMLPILDIFFNKWEVVLYHWLCSKNPNFEEVTKWYLGWKELIPPELLANEHVRYRLN
VGLDMMNQAVEGSEVAEPGLRENIRYLRVLEQRQFETQKKAAAQSQSRPSVGSNSGIQMD
GTGGGDEMNLKRVIEVYAQQNDLLFQLKPGRMQDGHQIYGFGKISIIIDSLNQKVFAQVE
DRWSLVSLEQLLDLQKSKSR
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcatcaggaaatggaaaggtttggcatggagaacgattttgaagatggtcag
tggatcagtggtgagttctactaccggaagcgcaaagaaaagaagcgtgttcaaaccaag
gatgatgtcctctatggtgtttttgcttccgacgatagtgactctgactatgagggatcc
ttcaagaagcggaaaaaaggcctttccacgaaggctgaccttaccaaacctgtcaacttt
gtttcaactggaactgtcatgcccgaccaagaaatagatcgcaatttcaaagaggagaag
aaccagaaaatgtccgaagagagcaaaggtttgggatccggagcatctgttggccttgga
tttggtactagttcctcgaagaatattgctgctgatggatacaccaaaacacaggcccag
attgaaattgaagaggaaaactttctgcccactgcttttgggaggatgattaaagaaggt
gccctaagacgtgagaaagaaagggaaaaggagaagtctatgttggccaagaaatcatct
gaatcagggagaagggaacctggtggtgatgttggtggctttgagaagcataccaagggg
attgggatgaagttgcttgagaagatgggttataagggaggtgggttgggaaaaaatgag
caaggaattttggctccagtcgaggcaaagcttaggcccaagaatatgggaatgggcttc
aacgactataaggagactagtgcaccaactcttcaagaatcagagggaaagcctgttgct
cgtcctgctcaacctgtggaaggccactcaaaagagaagctttggtcaaaacaagctaaa
aaactaaagaaggtttacattacagctgaagagttgttagccaaaaagcaggagcagggc
ctggaagttgttcagaaggtctttgatatgaggggtccacaggttcgagtcttgacgaat
ctggagaacttgaacgctgaagataaagcaagggaaaatgatgttccaatgcctgaactt
cagcataatattaggttgattgtggatttggcggaactcgacatacaaaaaattgacagt
gatttaagaaatgagagagaaacagttgttgctttgcagaaggagaaggagaagttccaa
gctgaggcagctcgccagaaaaggcagcttgataatatggaagagattgtcagtgtattg
gaccggattggggaagagagcacatctggtactctgaacctagactcccttgcagcagca
tttgcagatttgcagcagcagtattctgaggaatacaaactctgcaacttgtcaagcata
gcatgctcatatgctcagcctttatttatacgtgtttttcaaggatgggatccacttcaa
actccaacacatggaatggaggtggtttccaggtggaagtatcttttgcaaggggatgac
atttttactatctctgatgctgcatctccttatactcaaatattcatggaagttgttttc
cctgccattagaatatccggcaccaataactggcaggcaagggaccctgaaccaatgctt
cgttttttggagtcctgggagaagctgttgcctcctgtagtccttcagacaatactggaa
aacattgtcttgcccaagttatcagctgctgtggactcctgggatccacgtcgagaaaca
attccaattcattcctgggttcatccatggctgcccttattgggtcaaaggttggaaagc
tgctatcacactatacgtaacagattggaaagtgtactgcatgcttggcacccaagtgat
atgtctgcgtactacatattgtctccttggaagaccgtgtttgatacaattaactgggaa
aaactgatggtcagatttattgttccaaagttgttaaatgtaatgcatgaattccaaata
aatccagcaaatcagaaccttgatcagttctattgggtccgtacttgggctactgctatt
cccatccatcacatgcttccaatactggatatattcttcaacaagtgggaagtagttttg
tatcactggttatgctcaaaaaacccgaactttgaagaagtgacaaaatggtatttgggt
tggaaggaacttattccacctgaacttctggcaaatgaacacgttcgctatcgacttaat
gtcggtctagacatgatgaaccaggctgttgaaggctcagaggtggctgaacctggtttg
agggagaacatacgttatcttagggttcttgaacaaaggcagtttgagactcagaaaaaa
gcagcagcgcaatctcaatcccgtccttctgtgggctcgaacagtggaatccaaatggac
ggtacaggtggcggggatgagatgaacttgaaaagagttattgaagtttatgcacaacag
aatgatttgttgttccagcttaagccggggcgaatgcaagatggtcatcagatatatggt
tttggtaaaatcagcattattatagattctctcaatcagaaggtatttgcacaagtagag
gacaggtggtctttggtgtcacttgagcagctgttggacctgcaaaagtcaaagagccga
taa
DBGET
integrated database retrieval system
