Nicotiana sylvestris (wood tobacco): 104247393
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Entry
104247393 CDS
T05026
Name
(RefSeq) THO complex subunit 4A
KO
K12881
THO complex subunit 4
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03013
Nucleocytoplasmic transport
nsy03015
mRNA surveillance pathway
nsy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104247393
09122 Translation
03013 Nucleocytoplasmic transport
104247393
03015 mRNA surveillance pathway
104247393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsy03019
]
104247393
03041 Spliceosome [BR:
nsy03041
]
104247393
Messenger RNA biogenesis [BR:
nsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104247393
TREX complex
104247393
Spliceosome [BR:
nsy03041
]
Complex C
Other components
EJC/TREX
104247393
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
104247393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_3
DUF5320
Btz
Motif
Other DBs
NCBI-GeneID:
104247393
NCBI-ProteinID:
XP_009801704
UniProt:
A0A1U7YR50
LinkDB
All DBs
Position
11:147928970..147932643
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AA seq
252 aa
AA seq
DB search
MAEAALNMSLDDLIKKNKTGTGGKPRGRGRGGASGPGPARRFPNRSANRAAPYSTAKAPE
AAWNHDMFAAADQAFPFGQAGVGQAASSISTGTKLYISNLDYGVSNEDIKELFSEAGDLK
RYAIHYDRSGRSKGTAEVVFSRRQDALAAVKRYSNVQLDGKPMKIEIVGTNIATPTAPAF
NGAFGFGDANGGPRSGQARGGGFGRSRGGRGRGRGFRGGSRGRGRGDRGEKVSAEDLDAD
LMKYHSEAMQTN
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggcagctttgaatatgagcttagacgatctcatcaagaagaataaaaccggt
accggaggtaaacctcgcggcagaggtcgtgggggcgcctccggtcctggtcctgctcgc
cgattccccaatcgttcagctaaccgagctgcaccttattccaccgccaaggctcctgag
gcggcgtggaatcatgatatgttcgcggcggcagatcaagctttcccctttggacaagcc
ggtgttggtcaggcggcgtcttccatatcgactgggacaaagctctacatctccaatctt
gattacggcgtctccaatgaggatatcaaggagctcttctcagaagctggtgacctgaaa
cgctatgctatacattatgataggagcgggagatcgaagggaacggcagaggtggtcttc
tcgcgtagacaagatgcactagctgccgttaagaggtacagcaacgttcagcttgatggg
aagccaatgaagattgaaattgttgggaccaacattgccactcccactgcccctgctttc
aatggtgcttttggttttggagacgctaatggaggtcccagaagtggtcaagcaagaggt
ggtggctttgggaggtcacggggtggtagaggacgcggtcgcggatttcgaggaggcagc
aggggacggggaagaggagatcgtggagaaaaggtatctgcagaagatctagatgctgat
ctgatgaagtatcattcagaagcaatgcagacaaactga
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integrated database retrieval system