Nicotiana sylvestris (wood tobacco): 104247444
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Entry
104247444 CDS
T05026
Name
(RefSeq) probable pectate lyase P18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy00040
Pentose and glucuronate interconversions
nsy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104247444
Enzymes [BR:
nsy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104247444
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
104247444
NCBI-ProteinID:
XP_070023460
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Position
2:3209391..3212028
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AA seq
405 aa
AA seq
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MSSLLFIFVLFVTLLLTPLLVSSIQDPELVVQEVHRSINASLTRRNLGYLSCGTGNPIDD
CWRCDPNWEKNRQRLADCAIGFGKDAIGGRNGRIYVVTDSGNDDPVNPKPGTLRYAVIQD
EPLWIIFKRDMVIQLKQELVMNSFKTIDGRGTSVHISGGPCITIHYSTNIIIHGINIHDC
KQSGNGNIRDSPHHSGWWDVSDGDGISIFGGKNIWVDHCSLSNCHDGLIDAIHGSTAITI
SNNYFTHHDKVMLLGHSDSFTQDKGMQVTVAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH
WEMYAIGGSAAPTINSQGNRFLAPNQKFRKEVTKHEDAPESEWKSWNWRSEGDLMLNGAY
FRQTGAGASSSTYARASSLSARPSTLVGSMTTNAGPLGCKKGSRC
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtcttctcttcatatttgttctttttgtcacactactgctaaccccacttctt
gtttcttcaatccaagatccagagcttgtggtacaagaagttcataggagcatcaatgct
tcattgacgaggaggaacttgggctatttgtcgtgtggaacaggaaatccgattgatgat
tgttggcgttgtgaccccaattgggaaaaaaatcgccaacgtttagctgattgcgccatt
ggcttcggaaaggatgctattggaggaagaaatggaagaatttacgtggtcactgactca
gggaacgatgatcccgtaaaccctaaacccggaaccctaagatatgctgttatacaagat
gagcctttgtggatcattttcaaaagagacatggtcattcagctcaagcaagaactcgtc
atgaactctttcaagaccatagatggccggggcactagcgttcacatttcaggtggtcct
tgcattacaatccattacagcacgaacattatcatacacgggattaatatacacgactgc
aagcagagtggtaacggcaatattagggactcaccgcaccattcaggatggtgggatgtt
tccgacggagacggcatttcaattttcggagggaagaatatatgggtggatcattgttcc
ttgtcaaattgccacgacggtctaattgatgcaattcatggatccacagcaattacaatt
tctaacaactattttactcatcatgataaggtcatgttattgggacatagtgattctttt
acgcaggataaaggcatgcaagttacagttgcctttaatcattttggtgaaggtttggtg
cagagaatgccgaggtgtagacatggttatttccatgtggtgaataatgactatacccac
tgggaaatgtatgccattggtggtagtgctgctcctactattaatagtcaaggcaatagg
tttcttgctcccaatcagaaattccgtaaagaggtgacaaagcatgaggatgcaccagaa
agtgagtggaaaagctggaactggaggtcagaaggtgacttgatgttaaatggtgcctat
tttaggcaaacaggtgcaggtgcatcatcttctacttatgctagggcatcaagcttaagt
gcaaggccatctaccttggttggatccatgaccacaaacgccggtcctctcggctgcaaa
aaaggctctcgctgctag
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