Nicotiana sylvestris (wood tobacco): 104247485
Help
Entry
104247485 CDS
T05026
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03013
Nucleocytoplasmic transport
nsy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104247485
03015 mRNA surveillance pathway
104247485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsy03019
]
104247485
Enzymes [BR:
nsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104247485
Messenger RNA biogenesis [BR:
nsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
104247485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
104247485
NCBI-ProteinID:
XP_070021074
LinkDB
All DBs
Position
12:complement(102220028..102234364)
Genome browser
AA seq
508 aa
AA seq
DB search
MADSSSTTSSTTAFVADSSSATSSTAASTTAKSRETRSWADEADEIDQAEQSENASAETE
IGSLQIDESKRVNNSTLDDPVDSRIEAVTSGDTLYKSAKRFEDLNLSPELLKGLYVEMKF
ERPSKIQEISLPMILTPPYKNLIAQAHNGSGKTTCFVLGMLSRVDPKLRAPQALCICPTR
ELAIQNMEVLLKMGNFTGITSELAIPADAANYIPISKRPPVSAQVVIGTPGTINKWVTAR
KLGMSCMKILVFDEADHMLAESGFQDDSIRIMKAIVKASADCQVLLFSATFGESVKSFVT
KIVRDLFVKDYNQMFVKKEELSLDSVKQYKVQCPDELSKVMVIKDKILELGQKVGQTIIF
VRTRNSASMLHKSLVDYGYEVTTIQGALKQEDRDKIIKEFKEGLTQVLISTDLLARGFDQ
SQVNLVVNYDLPVRHESPSEPDHEVYLHRIGRAGRFGRKGAIFNLLCDDQDNMLMSKIEN
HFNSQVTEIASWKSEEDFENALKKAGLL
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggctgacagttctagtaccaccagtagcactaccgcgttcgtcgctgacagttctagt
gccaccagcagcaccgccgcttctacgacggcaaagtcacgagaaactagaagctgggca
gacgaagccgacgagatagatcaagccgagcagtctgaaaacgctagcgccgagactgaa
attggatctctacaaattgacgagtccaaaagagtcaacaactccactcttgatgatcca
gtagattccagaatagaagccgttacatctggcgacacgttgtacaaatcagcgaagaga
tttgaggatttgaacttgtctcctgagttattgaagggattatatgtagagatgaagttt
gagcgacctagcaaaattcaagagattagtttacccatgattcttacgccgccctacaag
aatcttattgctcaggctcataatggctctggtaaaactacttgctttgtacttggaatg
ttgagtcgggtcgatccgaagcttcgtgcacctcaagctctctgtatttgtccaaccaga
gaattggctattcagaatatggaagtgctgttgaagatggggaatttcactggtataaca
tcagagttagctatcccagcagatgcagccaactacataccaatttcaaagcggccacct
gtgtcagcacaagtagtaattggcacacctggaactataaataagtgggtgacagcaagg
aaactgggcatgagttgcatgaagattcttgtatttgatgaagcggaccacatgttggca
gagagtggttttcaggatgattccataagaataatgaaggcaattgtcaaagccagtgct
gactgccaggtgcttttgttttctgcaacgtttggggaaagtgtcaaatcatttgtgaca
aaaattgttagagatcttttcgtgaaagattataaccagatgtttgtgaagaaagaagaa
ctttcgctggattcagtgaagcagtataaagtgcagtgtccggatgaactttcaaaagtc
atggtgattaaagacaaaattcttgaactaggacagaaggtggggcaaacaattatattt
gttcgtacaagaaacagtgcgagtatgttgcataaatcattggtggactatggctatgaa
gtgacaacaattcaaggggctcttaagcaagaagatagagacaaaataatcaaggagttc
aaagaaggattgacacaagttcttatatcaactgatcttcttgctcgtggatttgatcaa
tcgcaggttaatttagtggttaattatgatctccctgtaagacatgagagtccatcagag
ccagatcatgaggtatacttgcatcggattggtagagcagggcgttttggccgcaaaggt
gccatattcaacttgctctgcgatgaccaagacaacatgctgatgtcaaagattgagaac
catttcaatagtcaagtgactgagatcgcctcatggaaaagtgaggaggattttgagaat
gctctgaagaaagctggcttgctctaa
DBGET
integrated database retrieval system
