Nicotiana sylvestris (wood tobacco): 104247532
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Entry
104247532 CDS
T05026
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nsy03036
]
104247532
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
nsy00535
]
104247532
Chromosome and associated proteins [BR:
nsy03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
104247532
Meiosis-specific proteins
Cohesin complex and associated proteins
104247532
Proteoglycans [BR:
nsy00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
104247532
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_23
DOT1
AAA_29
Motif
Other DBs
NCBI-GeneID:
104247532
NCBI-ProteinID:
XP_009801877
UniProt:
A0A1U7YCM6
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All DBs
Position
6:135924957..135947795
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AA seq
1201 aa
AA seq
DB search
MYIKQVIIEGFKSYREQVATEDFSPKVNCVVGANGSGKSNFFHAIRFVVSDLFHNLRSEE
RQAFLHEGAGHQVLSAFVEIVFDNSDNRMPVDKEEVRLRRTIGLKKDEYFLDGKHITKTE
VQNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ
ETGNKRKQIIQVVQYLDERLNELEQEKEELKKYQQLDKQRKSLEYTIFDKELHDARQKLN
EVEEARTKIAENSTEKYNSVLEAHEKSKELEKLSKDLTKEIQILSKEKEAVEKQRTEAIR
KRAKLDLDYKDLQEKMSTNIKAKDDAQKQLMLLEREIQETKNALNDIKPLHEKQVKEEED
ITRGIMDSEKKLSILYQKQGRATQFASKAARDKWLQKEIDEYERVLSSNVTQERKLRDEI
DQLKKDMRDQDDIIKHRRVEMDKKEILISGYRNAYNQYKVERDKMHDERKSLWTQETELT
TEIERLKAEVVKAEKSLDHATPGDIRRGLNSVRRICREYEISGVFGPIFELLVCDEKFFT
AVEVTAGNSLFHVVVDNDETSTKIIRHLNAQKGGRVTFIPLNRVKAPHVNYPNSSDVIPL
VKKLTFSDVYEKAFKQVFARTVICKDLDVATRVARTDGLDCITLEGDQVSKKGGMTGGFY
DYRRSKLRFMSTIKQNIVSINLKERELEEVRYKLQEIDQKINELVAEQQKNDAALAHDKS
ELEQLKQDIGNAERQRQSILKALQKKEKLLDNILSQIDQLRASIAVKQDEMGTELVDHLT
PEERDSLSRLNPEITTLKEKLIACRANRIETETRKEELEMNLSTNLERRKQELVAMNSSV
DVDMLQGEVESKNQELKDAESLVDHVTEELTRVSGSIDERNKRLKKIKQDKDKLKTLEDE
YQNTLQDEARELEQLLSKRNTCLAKQEEYSKKIRELGPLSSDAFETYKRRNVKELYKILH
KCNEQLKQFSHVNKKALDQYVNFTEQREELQRRQAELDAGDEKIKELISVLDMRKDESIE
RTFKGVAKHFREVFSQLVQGGHGFLVMMKKKDGEDDDNDPDDDEPRADMEGRVEKYIGVK
VKVSFTGQGETQSMKQLSGGQKTVVALALIFAIQRCDPAPFYLFDEIDAALDPQYRTAVG
NMVRDLADRGSTQFITTTFRPELVKVADKIYGVIHKNRVSRVNVISRDDALDFIEHDQSH
N
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgtatataaaacaggtcattatcgaagggtttaagagctaccgggaacaagtagccact
gaagattttagtcctaaagttaactgtgttgttggcgcgaatggatctggcaagtctaac
tttttccatgcaatccgttttgttgtaagcgacctctttcataacctgcgcagtgaagaa
aggcaggcttttcttcatgaaggagcaggtcaccaagtattatctgcttttgtggaaatt
gtatttgataattcagacaatcgaatgccggttgataaggaggaagtgcgactgcgaaga
acaatcggtctcaagaaggatgagtattttttggacggaaaacatatcacgaagacagag
gtccagaatttgctggaaagtgctgggttctctcgttctaatccctattatgttgtgcag
cagggaaagatagcatcattgacgttaatgaaggattcagaacgacttgatctgctgaag
gaaattggagggacacgtgtttatgaggagaggcgtcgagaaagtttaaaaatcatgcag
gaaactggtaacaagagaaagcaaattattcaagttgtacaatacttggatgagagattg
aacgagcttgaacaagagaaggaggaactgaaaaaatatcaacagcttgacaagcagcgt
aaatctctggaatacacaatttttgacaaagaacttcatgacgcacgccagaaattgaat
gaggtagaagaggctcggaccaaaattgctgagaactctactgagaagtataatagtgtg
ctggaggctcatgaaaagtccaaggagctggagaagttgtccaaagatctgacaaaagaa
attcaaattttaagcaaggagaaagaagctgtagagaaacagcggacagaggctatcaga
aagcgagctaagcttgatcttgattacaaagaccttcaagagaagatgtctacaaatatt
aaagctaaagatgatgcacagaaacaactcatgcttcttgaaagagaaattcaggaaaca
aagaatgcactcaatgatatcaagcctttgcatgagaaacaagtaaaagaggaggaggac
atcactagggggattatggatagtgaaaagaaacttagcattctttatcagaaacaaggc
cgtgccacccaatttgcaagcaaagctgccagggacaaatggctacagaaggaaattgat
gaatatgaacgagttttatcttcaaatgtaacacaggagagaaagcttagagatgaaatt
gatcagctcaaaaaagacatgagagatcaagatgatataatcaagcatcgtagagttgaa
atggacaaaaaagaaatcctcatatctggctatcgaaatgcttataatcagtataaagtg
gagagagacaagatgcatgatgagaggaagtccttgtggacacaggaaaccgagctcact
actgaaattgaacggctcaaggctgaagttgtgaaggcagaaaaaagcctagatcatgca
actcctggtgatatcagaaggggtctgaattctgtgaggaggatatgcagagagtatgaa
atctctggagtatttggcccgatttttgagttgcttgtatgtgacgaaaagttttttacg
gctgttgaagttactgctggaaacagcttattccatgtggtggttgataatgatgaaaca
tcaactaaaattattagacacctcaatgcacaaaaaggtggacgagttacatttattcca
ttgaacagggttaaggctccacatgttaattatccaaatagctctgatgtgattccgctt
gtgaagaaattgacgttttctgatgtatatgaaaaagcatttaagcaggtgtttgcaaga
acagtaatttgtaaagatctggatgttgctaccagggttgctcgtactgatgggcttgac
tgcattactcttgaaggtgaccaagttagtaaaaaggggggcatgaccggtggattttat
gactatagacgctcaaaattgaggtttatgagcaccatcaaacagaatatagtgtccatc
aacctgaaggagcgtgaacttgaggaagttagatataaacttcaagagatagaccagaaa
attaatgaacttgtggctgagcagcagaaaaatgatgctgccctggctcatgacaagtct
gagttagaacaacttaaacaagatattggtaatgctgaaagacagagacaatccatctta
aaagctcttcaaaagaaggagaaactgcttgataatattttgagtcaaatagatcagcta
agagctagtatagctgtgaaacaagatgaaatgggaacagaacttgttgatcatttaaca
ccggaagagcgagattctttgtcacgcttgaaccctgaaattacgactctgaaggagaag
ctgattgcgtgcagggcaaatcggatagagactgaaaccagaaaagaggagcttgagatg
aatctgtcaacaaatcttgaaagacgaaaacaagagttagtggcgatgaattcttctgtc
gacgttgatatgttacagggtgaagttgagagcaagaatcaggaacttaaggatgcagag
tcactagttgaccatgtgactgaagagcttacaagggtttctggaagtatagatgaacga
aacaagaggctcaagaagattaaacaggacaaggataagctgaagactcttgaagatgag
tatcagaatacacttcaggatgaagcaagagaattggagcagctactaagtaaacggaac
acttgtctcgccaagcaagaagagtactcgaagaaaatccgggaactgggtcctttatct
tctgatgcctttgagacgtacaaaagaaggaatgtaaaagaattatacaagatactgcac
aagtgtaacgagcagctgaaacaattcagccatgtaaacaaaaaagcacttgatcaatat
gtaaatttcaccgagcaaagagaagaactccaaagaaggcaagctgaattagatgctggt
gatgagaaaatcaaggaacttatatcagttttggatatgaggaaggatgaatcaattgag
cgcacgttcaagggtgtggctaaacatttccgtgaagtattctctcaactcgtgcaagga
ggtcatgggttcttagttatgatgaagaaaaaggatggcgaggacgatgacaatgatcct
gatgatgatgagcctcgtgctgatatggagggaagggttgagaaatatattggtgtgaaa
gtgaaggtgtccttcactggacaaggagaaacacagtcaatgaaacagttatcaggtggt
cagaaaactgtggtagcgctggcacttatatttgccatacaaagatgtgatcctgcccca
ttttatctttttgatgagatagatgcagcactagatcctcaatacagaacagccgtgggg
aatatggttcgtgatttggcagacaggggcagcacacaatttattacgacgacattccgg
ccggagcttgtgaaagtggctgataagatatatggtgtgatacacaaaaatagagttagc
cgtgtcaacgttatctccagggacgatgccttagattttattgagcatgatcaatctcat
aactga
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integrated database retrieval system
