Nicotiana sylvestris (wood tobacco): 104247556
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Entry
104247556 CDS
T05026
Name
(RefSeq) uncharacterized protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
104247556
Enzymes [BR:
nsy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
104247556
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
CarbopepD_reg_2
EMC7_beta-sandw
Ig_DR_A0283-like
Motif
Other DBs
NCBI-GeneID:
104247556
NCBI-ProteinID:
XP_070003445
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Position
5:complement(176382484..176395126)
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AA seq
664 aa
AA seq
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MGKNNKLSICLLEVTMVAFTFFIVAADSRPHNGERNTTTPEVKLEIQTEQVILSNGFANI
TLSKPDGHVTCISYGGMENLLATKNENDRGYWDVIWNNTGPQTTRKKFSATSFEVIIDNE
NQTEISFKRTWNASQSDQPPLNIDKRYIMLRDAPGFYTYSIVERLEGWPLSYIQNLRIVF
KLQEDMFHYMAVSDERQRVMPMEVDRKTGEVLDYKEAVLLTNSTNPDLKGEVDDKYFYTN
DNKDGKVYGWVSANPPVGFWMIIPSNEFRTGGPFRQDITTHVGPTVLSVFVSTHYAGEDL
AIKFQQGEPWKKVIGPVFVYLNSDGSAKGNPSILWDDAKKRMNQEVANWPYEFPVSKDYI
KSNQRGTVRGQILVKDSKQDVPVSNAYIGLAPPGDVGSWQRENKGYQFWTKTDSNGNFII
ENVISGTYNLYATVPGFIGDYKYTSDVEVTPGSSIKLGSLVYKPPRNGDTLWEIGVPDRT
AAEFFIPNPPPQYKVHKYKNNSESIFRQYGLWKQYSVLYPTNDLVYNVETSNYSRDWFYA
QVTRNVGINIFNATTWRIIFNLTSVDKASNYTLQLALAAAHEAELQVRVNDEKAEEPHFT
TGFIGGDNAIARHGIHGLYWLYSIRIQGNLLSKGANTIFLTQTIAITPYQGVMYDYLRLE
GPHQ
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaataataaactaagcatatgtttgttggaggtcactatggttgcgtttaca
ttcttcatagtagctgcagattctcgtccacacaacggagaaagaaatacaacaacgcca
gaagtcaaattggagatacaaacagaacaagtgatattgagcaatggcttcgcaaatatt
actttatcaaaaccagatggccacgtcacgtgcatatcatatggtgggatggaaaattta
ctagcgaccaaaaacgaaaacgatagagggtattgggatgttatctggaataatactgga
cctcagacaactcgaaaaaagttttcagcaacaagttttgaagtcataatagacaatgaa
aatcagacagaaatttcatttaaaagaacatggaatgcttctcaatctgatcaacctccc
ttaaacattgacaaaaggtatataatgctacgcgacgcgccaggattttatacatactca
atcgttgaacgtttagaaggatggccgctttcgtatatccaaaatctcaggattgtcttc
aagcttcaagaagacatgtttcactacatggctgtctctgatgagagacaacgggtcatg
ccaatggaagtggatcggaagactggcgaggtgcttgactacaaagaagccgttcttctt
actaactcgactaatccagatttaaaaggagaggtggatgacaagtatttctatacaaat
gataacaaagacggtaaagtttatggatgggtgagtgcaaatcctccggtaggattttgg
atgattattccaagcaatgaatttcgtactggaggaccatttagacaagacattactaca
catgttggtccaactgtactttctgtatttgttagtacacattatgcaggagaggatttg
gctataaaatttcaacaaggagaaccatggaaaaaagttattggccctgtctttgtgtat
cttaattcagatggttcagctaagggcaatccctccatactttgggatgatgctaagaaa
aggatgaatcaagaagtcgcaaactggccctatgagtttccagtttcaaaagactacatc
aaatctaatcaaagaggaacagttagaggccaaatacttgttaaagacagtaaacaagat
gtgccggtttccaatgcttatataggtttagcgccaccaggagatgttggatcttggcaa
agagaaaacaaaggatatcagttttggactaaaacagactctaatgggaattttatcata
gaaaatgttatatccggtacatataacttgtatgcaacagtcccaggatttattggtgat
tacaaatacacttcagatgtagaagtaactccaggttctagtattaaattagggagtttg
gtgtataaacctccaagaaatggagacacactatgggaaattggagtgccagatcgcaca
gctgctgaattttttattccaaatccacctccacaatataaagttcacaaatacaaaaac
aactctgaatcaatttttcgacagtatggtttgtggaaacaatacagtgttttatatcct
acaaatgatctagtttacaatgttgagactagcaattattcaagagactggttttatgct
caagttactaggaatgtaggaatcaacatatttaatgctaccacatggagaattatattc
aatcttaccagtgttgacaaggcctcaaattacactctccaacttgctcttgctgcagct
catgaagctgaattacaagttcgtgtcaatgatgaaaaagcggaagaacctcattttaca
acaggatttatagggggagataatgcaattgcaagacatggtattcacggattatattgg
ctttacagcattcgaatacaaggcaatttgctttctaaaggagcaaacacaatttttctt
acacaaacaatagctatcactccctatcaaggagtcatgtatgattatcttcgtttagaa
ggacctcatcagtga
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