Nicotiana sylvestris (wood tobacco): 104247623
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Entry
104247623 CDS
T05026
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy00040
Pentose and glucuronate interconversions
nsy01100
Metabolic pathways
Module
nsy_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104247623
Enzymes [BR:
nsy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104247623
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
104247623
NCBI-ProteinID:
XP_009801987
UniProt:
A0A1U7YD02
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Position
3:complement(177164722..177167139)
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AA seq
392 aa
AA seq
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MKMLISYFFALLLLPSLVFSVHDSPVFNVLDYGAVGDGLADSTNAFNKTWEATCSSSSSS
PTMYVPFGNTFLIHPLKLSGPCSSPGITIEINGNIVAPIEPSEWTCLTTHCDKWIYIKHV
NGLTVRGSGTINGRGHKWWDVNDRRKPTAFDISHSQNISVSGLRFKDNPHVHFHIEDSES
ATVSNITIDAPAKSPNTDGIHLSSSRDVSINHCRIGTGDDCISIVDGCSNLKISNIICGP
GHGISIGSLGKHGSNDTVENVLVSDVVFIKSTNGARIKTWQGGQGYAKNIIFERILSQDS
HNPIIIDQFYCDHENCIEQDLAVQVSGITFRQILGTSQGEFAVKLDCSAKVPCTGILMED
IYIRSGTKREAKSYINSAHGFVKGQNLPEIRL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgctcatctcatacttttttgctctactacttttgccttctttggttttttct
gtacatgattctccagtatttaatgttctggattatggtgcagttggagatggcttggcc
gattcaaccaatgctttcaacaaaacatgggaagcaacatgctcgtcatcgtcatcttct
ccaactatgtatgttccctttggcaatacgttcttgattcatcccttgaaactgagtggc
ccttgctcatcaccaggcattactattgagataaatggaaatatagttgcaccaattgaa
ccctcggaatggacgtgtttgaccactcattgtgataagtggatttatattaaacatgtt
aacggccttacagtacgtgggagtggaacaattaatggtcggggacacaaatggtgggat
gttaatgaccgcaggaaaccaactgcttttgatatttcacatagccaaaacattagtgta
agcggactgaggtttaaggacaaccctcacgttcattttcatattgaggactccgaatct
gctactgtctcaaacataaccatagacgccccagcaaaaagtccaaatactgatggtatt
catctttctagcagccgagacgtttccattaaccattgtcgaattggaactggggatgat
tgtatctcaattgtagatggatgttccaatctgaaaatcagcaacataatatgcggacca
gggcatggtataagtattggaagtctaggcaagcatggatcaaacgacactgttgaaaat
gttcttgtcagtgatgtggtgttcataaaatctacaaatggtgctcggataaagacatgg
cagggaggccaaggatacgctaagaacatcattttcgagagaatattgtcgcaagattct
cataaccctataattatcgatcagttctattgtgatcatgaaaactgtatagaacaagat
ttagcagtacaggttagtggtattacttttagacagatacttggaacttcccaaggtgaa
tttgctgtgaagcttgattgcagtgctaaagttccatgtacgggtatattaatggaggat
atatacatccgttcaggcaccaaacgtgaagctaaatcgtatattaatagtgcacatgga
tttgttaagggtcaaaatttacctgaaatccgcctttga
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