Nicotiana sylvestris (wood tobacco): 104247705
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Entry
104247705 CDS
T05026
Name
(RefSeq) probable rhamnogalacturonate lyase C
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
104247705
Enzymes [BR:
nsy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
104247705
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
104247705
NCBI-ProteinID:
XP_009802086
UniProt:
A0A1U7YJC4
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Position
5:complement(17304392..17313657)
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AA seq
684 aa
AA seq
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MNKMGWKRQWRLVSLFCAIVFQLFLLVCGSRVDNFRQTPLRISQKLTSSTPPVKLHISRN
YVVIDNGIVQVTLTNPTGAIAGVRYNGIDNILEHDFKDTNRGYWDTVWERPEDKGHTFDM
LLGTNFRVIAQNENKVEVSFTKTWNPSNNSSAHDLPLNIDKRFVMLRGSSGFYSYGIFEH
LKGWPTLIIEEARIAIKLRRALFHYMAISDDMQRMMPTDEDRSAGQVLDYKEAVLLTHPS
NPKLKGEVDDKYQYSFENKDIKVHGWVCNTPRVGFWVITPSNEYCNGGPMKQDLTSHAGP
TSLAVFFSGHYAGPELGVTLKEGEAWKKVFGPVFFYLNSDSSDNHRTLWEDAKRQMQEET
AKWPYDFPESLDYPHANERGIVRGQLFVRDRYINKDPMYAKSAYIGLALPGDVGSWQYET
KGYQFWTQTDKTGQFKITGVRPGTYSLYSWVPGIIGDYKYNYDINVKQGSDINLGHLVFD
PPRNGPTLWEIGIPDRTAAEFFVPDPLPGLRNQLFNNNNITQKFRQYGLWDRYTDLYPNK
DLVYKVGVSDYQKDWFFAHVTRRTRSKNYIPTTWQILFGLPSVDPKGTYTLHIALASATY
SHLQGRMNDPSRPKPHFEIPAIGRSNAIARHGIHGLYRLFSFQIQGYELQKGENTIYLKQ
IKSGNPFYGHHYDYIRLEGPPQKN
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgaataagatgggttggaagaggcaatggcgtctggtttcattgttttgtgctattgtt
ttccagcttttcttgcttgtttgtggttcaagggtggacaattttaggcaaactccactg
aggattagtcaaaagttgacatcatctactcctcctgtcaaactgcatatctcacgtaat
tatgtagtgatcgataatggcattgtccaagtcaccctaactaatccaactggagccatt
gctggggtgcgttacaatggtattgataatatcctagagcatgacttcaaagatacaaat
agaggatattgggataccgtgtgggaacgtcctgaagacaagggtcacacttttgatatg
cttttagggacaaatttcagagttattgcacaaaatgaaaacaaagtggaagtctctttc
acaaaaacatggaatccctccaataatagttctgcccatgatcttccactaaacattgac
aaaaggtttgtgatgttgcgtgggagttctggattttattcatatgggatatttgaacat
ttgaagggatggcccactctaattattgaggaagcaaggattgccatcaagcttagaagg
gctttgtttcactatatggccatatcagatgatatgcaaagaatgatgccaacagatgaa
gatcgctctgctggccaagtccttgactacaaagaagctgttttactaacacatccatca
aatcctaaacttaagggggaggtggatgacaagtaccaatattcgttcgaaaataaggat
attaaagtacatggatgggtttgcaatactccacgtgtaggcttttgggtgatcacacct
agtaatgaatattgtaacggcggaccaatgaagcaagatcttacttctcatgccggtccg
acatccttagccgtgtttttcagtgggcattatgcagggccagagttgggagtcacactc
aaagaaggagaggcatggaaaaaggtttttgggcctgttttcttctatcttaactcggat
tctagtgacaaccaccgtacactttgggaagatgctaaaagacagatgcaggaagaaact
gcaaaatggccatatgatttcccagaatctcttgactatccccatgctaatgaacggggt
atagttagaggtcaattattcgtacgagacaggtacataaacaaagatcctatgtatgca
aaatctgcatatattggattagctcttcctggagatgttggatcatggcaatatgagacc
aaaggttatcaattttggactcaaacagacaaaactggacaattcaagatcactggtgtt
agacctggaacttatagcttgtattcttgggtccctggaattataggagattacaaatac
aactatgacataaatgtcaaacaaggaagtgatattaacttaggtcacctagtttttgat
cctccaagaaatggtccaactctatgggaaataggcattcctgatcgaactgctgcagaa
ttctttgtgcctgatccattgcctgggctcagaaaccagttattcaataataataatata
acacaaaaatttagacaatatggtttgtgggatcgttacactgatttatatccaaataaa
gatttggtatataaagttggtgttagtgattatcaaaaagattggttctttgctcatgta
accaggagaactagaagcaagaattatataccaacaacatggcaaattttatttggactc
ccaagtgttgatccaaagggaacttatacactacatatcgcattggcttctgcaacctat
tcacatttgcaggggaggatgaatgacccatctagaccaaagcctcattttgaaattcca
gcaattgggaggagtaatgcaatagctagacatggaatacatggactatataggctcttc
agtttccaaattcaagggtatgaattacaaaagggagaaaatacaatatatttaaagcaa
attaaaagtggtaatcctttctatggacatcactatgactacattcgtttggaaggccct
ccacaaaaaaattga
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