Nicotiana sylvestris (wood tobacco): 104248015
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Entry
104248015 CDS
T05026
Name
(RefSeq) beta-xylosidase/alpha-L-arabinofuranosidase 1-like isoform X1
KO
K15920
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy00520
Amino sugar and nucleotide sugar metabolism
nsy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
104248015
Enzymes [BR:
nsy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
104248015
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GFIT
Motif
Pfam:
Glyco_hydro_3_C
Glyco_hydro_3
Fn3-like
Motif
Other DBs
NCBI-GeneID:
104248015
NCBI-ProteinID:
XP_009802493
UniProt:
A0A1U7YH89
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Position
4:complement(3872406..3878124)
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AA seq
809 aa
AA seq
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MANFTFLHFFTILIFSFLISRISARNIPYNSSITALNDLTYNQTRRVCDTSRFAKLGLDM
NDFAYCDKSLPYAVRVKDLIDRMTLSEKARQIGDTAFGVARIGLPKYEWWSEALHGVSNV
GQYYSLASFFDKVVPGATSFPTVITTTASFNESLWKAIGQAVSTEARAMFNLGHAGLTFW
SPNINVVRDPRWGRVLETPGEDPFVVGKYASNYVRGLQDVEGTENAKDLNSRPLKVAACC
KHYAAYDVDNWLGVDRYHFDSRVTEQDMMETFLKPFEMCVKEGDVTSVMCSYNRINGIPA
CADPKLLKGKIRGDWDLHGYIVSDCDSIEVMLHGHKWLGDEPEDAVAQGLKAGLDLDCGN
YYTNYAGNAVVQGKVKESEIDESLTNLYFVLMRLGFFDGSPKFENLGKEQICSKENIELA
TQAAREGIVLLKNEDQILPLNSKKVKTIAVVGPHANASSAMIGNYAGIPCKITTPIHGFS
LYSKVDYKAGCGEILCKNESLIFPAMKAAKKADATVLIVGLDLSVEAESLDRVDLLLPGY
QTQLINQVAQVSKGPVILVIMSAGGIDISFAKNNPKIKSIIWAGYPGEEGGRAIADVVFG
SYNPGGKLPLTWHENSYVDMLPMTSMPLRPIDNLGYPGRTYKFFNGSTVYPFGYGLSYTN
FTYNLLSARQKIQVKLNKFQHCRDLNYTAGTHVPPCRAVSIDDLECGDDLNFDFSIEVEN
IGKKDGSDVLMIYWIPPEDIAEAPLKQLIGFKKVFVKIGEKKKVDFVLNACKNLGIVNYR
AYNLLAAGGHNFVIGNGKLSFPVQVSFHR
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggcaaactttacctttcttcatttcttcaccattttaatattttcctttctcatttca
agaatttctgctagaaatattccatacaattcttcaatcacggccctcaatgacctcaca
tataaccaaactcgacgtgtttgtgacacgtcgaggtttgcaaagttgggtttggacatg
aatgattttgcgtactgcgacaagtcccttccctatgcagttagggttaaagatttgatt
gacagaatgacgttgtctgaaaaagcgcgacaaattggagatactgcttttggagttgct
aggattggtcttcctaaatatgaatggtggtctgaggcattacatggtgtttctaacgtt
ggacaatattatagtttagcttcgttttttgacaaagttgtccctggggctacaagtttt
cctactgttattactactactgcatcatttaatgagtcattgtggaaagcaattggccag
gcagtttcaacagaagcaagagccatgtttaacctaggacatgctggtctaacattttgg
agtccaaatattaatgtagtaagagatcctagatggggaagagttttagaaacacctgga
gaagatccttttgttgttggaaaatatgcctctaattatgttagaggtttacaagatgtc
gagggaacggaaaacgctaaagacttgaactcgagacctctgaaagttgccgcgtgttgc
aaacattatgcagcttatgatgttgataattggcttggcgttgatcgctaccattttgat
tcacgggtgacagagcaagatatgatggaaacatttcttaaaccatttgaaatgtgtgtt
aaagaaggtgatgttacaagtgtaatgtgctcgtataataggattaatggaattccagca
tgtgctgatccaaagcttttaaaaggcaaaattagaggagattgggatcttcatgggtat
atagtttcagattgtgattccattgaagttatgcttcatggccataaatggttaggagat
gaacctgaagatgctgttgcacaaggtctaaaagcaggattggatttggattgtggcaac
tactacacaaattatgctggcaatgcagttgttcaaggaaaagtaaaagaatcagaaata
gatgaatctctcacaaatttgtattttgtgctaatgaggctagggttttttgatggtagt
ccaaaatttgaaaatcttggaaaagaacaaatttgttctaaggaaaatattgaattagca
acacaagcagcaagagaagggattgttcttcttaaaaatgaagaccaaattttgcctttg
aattctaaaaaggttaaaactattgctgttgttggacctcatgctaatgcctcaagtgcc
atgattggcaattatgcaggtattccatgcaagattacaacaccaatacatggattttca
ttgtatagcaaagtggactataaagcaggatgtggagaaattttgtgcaaaaatgagagc
ttaatattcccagcaatgaaagcagctaaaaaagcagatgcaactgttttaattgtggga
ttagatttaagtgttgaagcagaaagtttagacagagttgatttattacttcctggatac
caaactcaactaataaatcaagttgctcaagtttcaaaaggtcctgttattcttgtaatt
atgtctgctggtggtattgatatttcatttgccaaaaataatcctaagattaaaagtatt
atttgggctggatatcctggtgaggaaggtggtcgtgccattgctgatgttgtttttgga
agttacaatcccggaggaaaactaccattaacatggcatgaaaatagttatgtggatatg
ttaccaatgacttcaatgccattaaggccaattgacaacttaggataccctggtagaact
tacaaatttttcaatggatcaactgtttatccatttggatatggtcttagctacacgaat
ttcacctacaacttattatcagcacgacaaaagatccaagtaaaactcaacaaattccag
cactgtcgcgatctgaactacactgctggcactcacgtgccaccatgtcgtgcagtgtca
atcgatgacttggaatgtggggacgatctgaatttcgacttctcgattgaagtagagaat
attgggaaaaaagatggaagtgatgttttaatgatttattggattccacctgaagatatt
gctgaagctccacttaaacaattgattggttttaagaaggtttttgtgaaaattggagag
aaaaagaaggttgattttgtgttaaatgcttgcaaaaatttgggaattgtgaattataga
gcttataatcttttggctgctggtggacataattttgttattggaaatggaaagctttca
tttccggttcaagttagttttcaccgatga
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