Nicotiana sylvestris (wood tobacco): 104248076
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Entry
104248076 CDS
T05026
Name
(RefSeq) squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy00100
Steroid biosynthesis
nsy00909
Sesquiterpenoid and triterpenoid biosynthesis
nsy01100
Metabolic pathways
nsy01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
104248076
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
104248076
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
nsy01006
]
104248076
Enzymes [BR:
nsy01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
104248076
Prenyltransferases [BR:
nsy01006
]
Terpene biosynthesis
Squalene/phytoene synthase
104248076
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
DUF2172
HEPN_SAV2148
Motif
Other DBs
NCBI-GeneID:
104248076
NCBI-ProteinID:
XP_009802568
UniProt:
A0A1U7YHG1
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Position
1:183648456..183657172
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AA seq
411 aa
AA seq
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MGSLRAILKNPEDLYPLVKLKLAARHAEKQIPPSPHWGFCYSMLHKVSRSFALVIQQLPV
ELRDAVCIFYLVLRALDTVEDDTSIPTDVKVPILISFHQHVYDREWHFSCGTKEYKVLMD
QFHHVSTAFLELRKHYQQAIEDITMRMGAGMAKFICKEVETTDDYDEYCHYVAGLVGLGL
SKLFHASGKEDLASDSLSNSMGLFLQKTNIIRDYLEDINEVPKCRMFWPREIWSKYVNKL
EELKYEDNSAKAVQCLNDMVTNALSHVEDCLTYMSALRDPSIFRFCAIPQVMAIGTLAMC
YDNIEVFRGVVKMRRGLTAKVIDQTRTIADVYGAFFDFSCMLKSKVNNNDPNATKTLKRL
EAILKTCRDSGTLNKRKSYIIRSEPNYSPVLIVVIFIILAIILAQLSGNRS
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggggagtttgagggcgattttgaagaatccagaggatttgtatccattggtgaagttg
aagctagcggctcgacacgcggagaaacagatcccgccgtctccacattggggcttctgt
tactcaatgcttcataaggtttctcgtagctttgctctcgtcattcaacaacttcccgtc
gagcttcgtgacgccgtgtgcattttctatttggttcttcgagcacttgacactgttgag
gatgataccagcattcccaccgatgttaaagtacctattctgatctcttttcatcagcat
gtttatgatcgtgaatggcatttttcatgtggtacaaaggagtacaaggttctcatggac
cagttccatcatgtttcaactgcttttctggagcttaggaaacattatcagcaggcaatt
gaggatattaccatgaggatgggtgcaggaatggcaaaattcatatgcaaggaggtggaa
acaaccgatgattatgacgaatattgtcactatgtagctgggcttgttgggctaggattg
tcaaaactgttccatgcctctgggaaagaagatctggcttcagattctctctccaactcc
atgggtttatttcttcagaaaacaaacatcattagagattatttggaagacataaatgaa
gtacccaagtgccgtatgttctggccccgtgaaatatggagtaaatatgttaacaagctt
gaggaattaaagtacgaggataactcggccaaagcagtgcaatgtctcaatgacatggtc
actaatgctttatcacatgtagaagattgtttgacttacatgtctgctttgcgtgatcct
tccatctttcgattctgtgctattccacaggtcatggcaattgggacattagctatgtgc
tacgacaacattgaagtcttcagaggagtggtaaaaatgagacgtggtctgactgctaag
gtcattgaccagaccaggactattgcagatgtatatggtgctttttttgacttttcttgt
atgctgaaatccaaggttaataataatgatccaaatgcaacaaaaactctgaagaggctc
gaagctatcctgaaaacttgcagagattcgggaaccttgaacaaaaggaaatcctacata
atcaggagcgagcctaattacagtccagttctgattgttgtcattttcatcatactggct
attattcttgcacagctatctggaaaccgatcttag
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