Nicotiana sylvestris (wood tobacco): 104248341 Help Entry 104248341         CDS       T05026                                  Name (RefSeq) uncharacterized protein   KO K12867   pre-mRNA-splicing factor SYF1 Organism nsy  Nicotiana sylvestris (wood tobacco) Pathway nsy03040   Spliceosome Brite KEGG Orthology (KO) [BR:nsy00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     104248341  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:nsy03019]     104248341    03041 Spliceosome [BR:nsy03041]     104248341 Messenger RNA biogenesis [BR:nsy03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      104248341 Spliceosome [BR:nsy03041]  Complex B   Other components    Prp19-related factors     104248341  Complex C     104248341 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf Mad3_BUB1_I TPR_15 ARM_TT21_C TPR_19 NRDE-2 ARM_TT21 Motif Other DBs NCBI-GeneID:  104248341 NCBI-ProteinID:  XP_009802891 UniProt:  A0A1U7YLM7 LinkDB All DBs Position 9:complement(118318613..118326876) Genome browser AA seq 914 aa AA seqDB search MSIPKELYPSQDDLPYEEELLRNPFSLKLWWRYLVARADSPFKKRAVIYERALKALPGSY KLWHAYLRERLELVRNLPVTHSQFQTLNNTFERALVTMHKMPRIWIMYLVSLTEQKLVTR TRRTFDRALCALPVTQHDRIWEPYLVFVSQWGIPIETSLRVYRRYLKYDPSHIEDLLEFL LNSELWQEAAERLAGVLNDDQFYSIKGKTKHRLWLELCDLLTQHATEISGLNVDAIIRGG IKKFTDEVGRLWTSLADYYIRRKLVEKARDIFEEGMTTVVTVRDFSVIFDAYSQFEESML ALKMEEMSDSEVEDEETNSEVGVEEDVDEEDDRLNVAKLEKKLRGFWLNDDKDVDLRLAR LEHLMDRRPELANSVLLRQNPHNVEQWHRRVKLFEGNPTKQILTYTEAVRTIDPMKAVGK PHTLWVAFAKLYENHKDIANARVIFDKAVQVNYKTVDHLASVWCEWAEMELRHRNFKGAL ELMRRATAEPTVEVKRRVAADGNEPVQMKLHKSLRLWLLYVDLEESLGTLESTRAVYERI LDLKIATPQIIINYAVLLEDHKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKRYGK SKLERARELFEHAVEETPADAVKPLYLQYAKLEEDHGLAKRAMRVYDQATKAVPANEKLS MYEIYIARAAEIFGVPRTREIYEQAIESGLPDKDVKVMCLKYAELEKSLGEIDRARALYK HSSQFADPRSDPDFWNKWHEFEVQHGNEDTFREMLRVKRSVSASYSQTHFILPEYLMQKD QMQTLEEAKDVLKKAGVADDEMAALERQLVPPEDETKGKEQSRVVGFVSAGVVESNGQKV TTNNEDIELPEESDSEEEEKVEIAQKDVPAAVFGGLIRKREEGDEAEDDSAAKNKDNDGH LGALERIKRRRQGS NT seq 2745 nt NT seq  +upstreamnt  +downstreamnt atgtcaatccccaaagagctctaccctagccaagatgaccttccgtacgaggaagagctc ctccgcaacccgttcagcttgaaactgtggtggcgttatttagtggcacgagcagattcg ccattcaagaaaagagcagtaatttacgaacgagctctaaaagctctacccggaagttac aaattatggcacgcgtatctccgcgaacgcctcgaattagttcggaatcttccagttact cactcgcagttccaaaccctaaacaacactttcgagagagctctcgttacgatgcacaaa atgccgcggatttggatcatgtacctggtaagtttaactgagcaaaagctcgttacccga acccgacgcacttttgatagagcattgtgtgcgttgcctgttactcagcatgataggatt tgggaaccttatttagtgtttgttagtcaatggggaattcctattgaaacttcacttagg gtttataggaggtacttgaagtatgacccttcacatattgaggatttgctcgagtttttg ttgaattccgagctgtggcaggaggcggccgagaggttagctggtgtattgaatgatgat cagttttattctattaaagggaagactaaacataggctctggttggagttgtgtgacttg ttaacacagcatgctactgaaatttcgggtttgaatgtggatgcgattattcgaggaggg attaagaagtttacggatgaggttgggaggctttggacatcattggcggattattacatt aggaggaagttggttgagaaggcgagggatattttcgaagaagggatgaccactgtggtc actgttagggattttagtgttatttttgatgcatactcgcagtttgaggaaagtatgctt gccttgaaaatggaggagatgagtgacagcgaggtggaggatgaagagactaacagtgag gttggggtggaggaagatgtggacgaggaggatgatcggttgaatgtggcaaaattggaa aagaagcttagagggttttggttaaatgatgataaggatgttgatttgagattagcgagg ctagaacatcttatggataggaggccggaactcgcgaatagtgtcctactaaggcaaaat ccacataacgtggaacaatggcatagaagggtaaaacttttcgaagggaatccgacgaag caaatattaacatacactgaggcagttagaactattgacccaatgaaggctgtgggaaag ccacatactttgtgggttgcatttgcaaaactttatgaaaaccataaggatattgcaaat gcaagagtcatctttgataaggcagttcaggtgaactacaaaactgtggatcatctggct agtgtttggtgtgaatgggcagagatggaactacggcacaggaatttcaagggtgctctg gaactgatgagacgtgccactgctgaaccaactgttgaggtcaagcggagagttgctgct gatggaaatgaaccagtgcagatgaagctacacaaatctctaaggctttggttattgtat gtggatttggaggagagtctaggaaccctagagtcaactcgtgcagtatatgagagaatt ttggatctgaaaattgctacgccccagattataataaactatgcagtacttctggaggat cataagtactttgaggatgcattcaaggtttatgagaggggtgtgaagatcttcaagtac ccacatgtaaaggatatatgggttacctatctttccaaatttgtgaagagatatgggaag tcaaagctggaacgagctagagagttatttgagcatgccgtggaagagactcctgctgat gctgtgaagccattgtatcttcaatatgctaaattagaggaagaccatggtcttgccaag cgggctatgagagtgtatgatcaagctacaaaagctgttccagcaaatgagaaattgagc atgtacgagatttacatagcccgggcagctgagatatttggtgttccaagaacaagggag atatatgaacaagcaattgagtctgggcttccagacaaggatgtgaaagttatgtgctta aagtatgctgaactggagaagagcctaggagagatcgaccgtgcccgtgcactatacaaa cactcatcacaattcgcagaccctagatcagaccctgatttctggaataagtggcatgag tttgaggtgcagcatggaaacgaggataccttccgcgagatgctccgtgtgaagaggagt gtatctgcaagctacagccagacacattttatcctacctgagtatctcatgcaaaaggat cagatgcagacccttgaggaagcaaaggatgtgttgaaaaaagctggtgttgctgatgat gagatggcagctcttgagaggcagttagtgcccccagaagatgaaacaaagggcaaagaa cagagtcgggtagttggatttgtaagtgcaggagtagttgaatcaaatggacagaaagtg acaacaaacaatgaggatattgagctacctgaggaaagtgactctgaagaggaagagaag gttgagattgcgcagaaggatgtccctgctgcagtttttggaggtttaatccgtaagagg gaagaaggtgacgaagcagaggacgactctgctgccaagaacaaagataatgatggtcat cttggtgctctagaaagaataaaacgaaggagacaaggctcttag

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