KEGG   Nicotiana sylvestris (wood tobacco): 104248544
Entry
104248544         CDS       T05026                                 
Name
(RefSeq) protein decapping 5-like
  KO
K18749  protein LSM14
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nsy03019]
    104248544
Messenger RNA biogenesis [BR:nsy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     104248544
SSDB
Motif
Pfam: LSM14 FDF SM-ATX
Other DBs
NCBI-GeneID: 104248544
NCBI-ProteinID: XP_070003887
UniProt: A0A1U7YJ15
LinkDB
Position
6:197377067..197386500
AA seq 657 aa
MATVASKAADSYIGSLICLITKSDIRYEGFLFHLDALESTIGLRNVKSYGTEGRKQDGPQ
ISPSDKIYEYIFFRGSDIKDLQVISSPPPQSTSVVPDDPAIIQSHFPNPIPSTTGMTSPG
AAQVADVSASAPSILPVAPFQVNLAPNLSPPSSSLWGSLPPPPVNINGPAVPNYWPGLVG
SSGGVSQFQQQRFPPPPQSLVASLPIQQQAQYQNVNASLAGGSSLAAQHHPLLLPINTAS
PNLLPPMPSSGQSNAGQPAKPFLNLSSIPMPNNAFRALPTVAVDSGPITVSALEAELNVN
AILAPVTKEPSSTISTSDSFSTISQTVSSTVDTKDASLSNLSRSSLLSPEVLSGVKDSSS
PQSLQTSNADVQTVKASVSEPLPSGSTEETVESISKSTTKILHGSTSSHHNRSHFARGRD
GAHQATLSTHHNSKGHTHRGNAPKGAAVYTHQNYRMHASGRGNGLVGAALHSRQNNMGMG
RGQVPNGVPQLNHRNVGGQFRGRGAKNSHLVKRFSEEFDFEAMNERFNKKEVWDFLGKSN
KAESDDGIEDGKDMDDSYAQDEAGDGNAKHDYKPVYCKDDFFDSLSCHTLDRESGKVKFS
EQRKKDAETFGETRKNQQGRGRGARMSGASRGSYRGRGYDNARGGRGQGRTVWGRVT
NT seq 1974 nt   +upstreamnt  +downstreamnt
atggcaacggtggcctctaaggcagccgactcctacattgggagtctcatttgcttgatt
acaaagtctgatattcgttatgaaggatttctcttccatctcgatgctctagaatccacc
atcggccttcgcaacgtgaaatcgtatgggacagaaggacgaaagcaggatggacctcag
atctctcccagtgacaaaatttacgagtacattttcttccgaggtagtgacataaaggat
ctgcaggttatatcctcaccaccccctcaaagtacttcagttgtgcctgatgatcctgcc
ataatacagtctcattttcctaaccccataccatcaaccacgggcatgacatctcctggt
gctgcacaagtagcagatgttagtgccagtgcgccatccatactccctgttgcacctttc
caggtgaatcttgccccgaatctgtcgccaccaagttctagcctttggggctcgcttcct
cctccacctgtaaatatcaatgggcctgctgtgcctaattattggcctggattagttggg
tcctcaggaggagtttctcaatttcaacagcaacgttttcctcctccaccacagagtttg
gttgcgtcccttcccattcagcagcaagcacaataccaaaatgtgaatgcatctctagcc
ggaggatctagtttggcggcacaacatcacccattgctgctgcctattaatactgcttcc
ccaaatttgcttcccccaatgccgtcatctgggcaatccaatgctggacagcctgctaaa
ccgtttcttaatttgtcatctattccaatgccaaataatgcattccgtgctcttccaact
gtagcagtggattctggcccaataacggtgtctgctctggaagcagaacttaatgtcaat
gctattctggctccagtaactaaagaaccaagttccaccattagcacttcagattctttc
tccacaatctcgcaaactgtgtcatctactgtagacacaaaagatgcatctctcagcaat
ctgtcaagatcatctctcttgtcaccagaggtgctgtcaggagtgaaggattcctcatca
cctcaatcattgcaaacgtcaaacgctgatgtacagactgttaaagcatcagtatcagaa
cctctaccatcagggagtacagaagaaaccgtggagtcaatatcaaaatctacaactaaa
atattacatggatctacatcatctcatcacaatagaagtcactttgctcggggaagagat
ggggcacatcaagccacattatccactcatcacaatagtaaaggccacacacacagagga
aatgcgccaaaaggagctgctgtatatacacatcaaaattataggatgcatgcatcagga
agaggaaatgggcttgttggagctgctctacattctcgtcagaataatatgggcatgggc
agaggacaagtgccaaatggtgtgcctcaactcaatcatcgcaatgtgggaggtcaattt
cgtggacgtggagcaaagaattcccatttggttaaaagattctccgaggagttcgatttt
gaggcaatgaatgaaaggttcaataagaaagaggtatgggattttctaggcaaaagtaac
aaagctgaatcagatgatggaatcgaggatgggaaagatatggatgacagttatgcacag
gatgaagctggggatggaaatgcaaaacatgattacaagcctgtttattgtaaggacgac
ttctttgattctctttcctgccatacacttgatcgtgaatctggaaaagtgaagttttct
gaacaaaggaaaaaagatgccgagacatttggtgagactaggaaaaaccaacagggtcgt
ggccggggagctcgcatgtcaggggcatctcgaggctcatatcgtggaagaggctatgac
aatgcacgtggtggccgcggccaaggaaggactgtctggggtcgcgtcacttga

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