Nicotiana sylvestris (wood tobacco): 104248577
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Entry
104248577 CDS
T05026
Name
(RefSeq) uncharacterized protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
104248577
Enzymes [BR:
nsy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
104248577
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
104248577
NCBI-ProteinID:
XP_009803162
UniProt:
A0A1U7YGC3
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Position
4:140304510..140310063
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AA seq
662 aa
AA seq
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MIVPKHSQMSPRVLQQQDQVVIDNGVFQLRLTNPGGKIIGIQYNGIDNLLDLNNPILNGG
FWDLNWSEPGTAGTRGKFDEIEGNSFKVIVENEEQIELSFIRTWDPSLQGEHSPLTIDKR
FIVLRDSPGFYSYAIYEHKEDMPAFNLNETRIAFMLSIEKFRYMVMADDRQRLMPLPEDR
VPPRGKELAYPEAVLLVDPVEPEFKGEVDDKYQYSCENKDNKVHGFICLDPPVGFWEITP
SNEFRTGGPIKQDLTSHVNPTTLAMFVSTHYGGQDFVIKFGSGEPWKKVFGPVFIYLNSV
ADKHDTLSLWDDAKERMQKEVDCWPYSFPSSEDFPKADQRGAIRGRLLVHDRYINKEYLS
AKGAFVGLAPPGDAGSFQRECKGYQFWTNSDDEGYFTIRNIRPGDYNLYAWVPGFIGDYR
YEKSIAMAAGSNHLEVDVGELVYEPPRSGPTLWEIGIPDRSAAEFYIPDPNPQYINKLYV
NQPVHRFRQYGLWERYADLYPNQDLVYTVGSSDYRKDWFYAQVTRKVGDKAFEPTTWQIK
FSLDSVDQTGNYTLRIALSSSTQSILEVRVNEAEANPPHFSSGLIGSDNAIARHGIHGLY
WLFNVEVAAGQLLQGENIIYLKQAWSVSALHGIMYDYIRLEAPPLSATHFQWRIQRRFCG
FN
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgccaaagcattcacagatgtcacctcgagttcttcagcaacaggaccaagtg
gtaatagataatggcgtattccaactcagattgacaaatccaggaggcaaaattattggt
attcaatataatgggattgacaatctgctggacctcaacaacccaatcttaaatggagga
ttctgggacttaaactggagtgaacctggaactgctggaacaagaggaaaatttgatgag
attgaaggtaatagttttaaagttatagtggaaaatgaagaacagatagagctctcattt
attaggacatgggatccttcacttcagggcgagcattccccgttaaccatagacaaaagg
ttcatagtacttcgggattcgcctggtttttactcttatgctatttatgaacacaaagag
gatatgccggcattcaacctcaatgaaaccaggatagctttcatgctcagcatagaaaag
tttcggtacatggttatggcagatgataggcaaaggctaatgcccctccctgaagatcgc
gtacctccaagagggaaggaattggcatatccagaagctgtcctgcttgtcgatcctgtt
gaaccagaatttaaaggagaagttgatgacaagtaccaatattcgtgtgagaacaaagat
aacaaagtccatggtttcatatgcttagaccctccagtcggattttgggaaataactccg
agcaatgagttcagaacaggtggacctatcaaacaggatcttacttcccacgttaatcca
actactctggctatgttcgtgagcactcattatggagggcaggatttcgtgattaaattt
ggatcaggtgaaccatggaagaaagtttttggtcctgtttttatatatctcaattctgta
gcagacaaacacgatacactttccctttgggatgacgccaaagaacggatgcagaaagaa
gttgactgttggccttatagtttcccaagttcagaagattttccaaaggcggaccaaaga
ggtgccatccgtggtagattactagtccatgacaggtatataaacaaggagtatttatct
gcaaagggtgcttttgtggggctagctccacctggagatgctggatcatttcaaagagaa
tgcaagggctaccaattctggacaaactcagatgatgaaggctattttacaatccgaaat
attcgtccaggggactataacctctatgcttgggtacctggcttcattggagattacaga
tatgaaaaatccatagcaatggctgcaggttcaaatcatttagaggttgatgttggtgaa
cttgtgtatgagcctccaagaagtggtcctacattgtgggaaatcggcatccctgatcgt
tctgctgcagaattctacattcccgaccctaatccacagtatattaacaaactctacgta
aatcaaccagtacacaggtttaggcagtatggattatgggagagatatgcagatttatat
ccaaatcaagatttggtttatacagttggaagtagtgactatagaaaagattggttctat
gctcaagtgaccagaaaagtgggtgataaggcatttgaaccgacaacctggcaaattaaa
ttcagtttagatagcgttgaccaaactggaaattacacactgcgaattgcactctcatct
tcaactcagtcgatattggaggtaagggtgaatgaggcagaagcaaatccaccccatttc
tcaagtggattgattggaagtgataacgcgattgccagacatggaatccacgggttatat
tggttgtttaacgtggaggtagctgcaggacaactccttcaaggagagaatatcatatat
ctcaaacaagcatggagtgtcagtgctttgcatgggattatgtacgactatattcgtctg
gaagctcctcctctttccgccacacactttcaatggcggatccagaggaggttctgtggg
ttcaactaa
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