Nicotiana sylvestris (wood tobacco): 104248968
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Entry
104248968 CDS
T05026
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g15820, chloroplastic
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nsy03041
]
104248968
Spliceosome [BR:
nsy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104248968
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Gene cluster
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR_2
PPR
PPR_long
PPR_3
ARM_TT21_N
PPR_1
NT_N
Motif
Other DBs
NCBI-GeneID:
104248968
NCBI-ProteinID:
XP_070018650
UniProt:
A0A1U7YKH8
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Position
11:complement(124942797..124951192)
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AA seq
797 aa
AA seq
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MMIISFVQYPMSTALTFLHSLSSSPFHHRHRPRLLSTSSPFSLPLKPLSFSPLSTLPQQV
LFSSHEIQGNNNLDISSSVFPESFNFDESFDSTELKKFETPAVEVSELEDIPDQWRRSRL
AWLCKELPAHKTPTMVRILNAQRKWLKQEDATYIAVHCMRIRENEAAFRVYKWMMQQHWF
RFDFALATKLADYLGKERKHLKCREIFDDIINQGRVPSESTFHILIIAYLSSPGPSELDE
ACNIYNRMVHLGGYKPRLNLHNSLFKALLGKKPGSSKHFLKQAEFIYQNLTSSGLDIHKD
IFGGLIWLHSYQDVVDMERIAVLRAEMRSRGIQESKEVLLSVLRACSKDGDLEEAERTWS
KLLSDDRSPPSQAFVYKMEVYAKIGEPMKSLEVFRRMQKQLSSTSVAAYYKIIKVLSKSQ
RLDLAESIMSEFINSGMKPLIPSFIDLMGMYSIAGLHEKMETTFLRCREVCGPNQTVFNI
YLDSLVHTGNLNRAEEIFNEMRGDVAISLDSRSCNSILRGYLTSGEYAKAEKIYGLMRQK
KYDIEIESSLMEKLDYVLSLREKVVEEPIKLKLTKEQREVLMGLLLGGLQIRSYGERRRR
VHAIHFEFNAESRIHAILKGHIHNEFHQWLGSHDMMVDGTDDIPSSFTTISHSCFTFYAD
QFWPNGRPGIPKLIHRWLSPCVLAYWYMYGGYRTSSGDILLRVKGSREEVLNIVKALKDK
SLDCRVKKRGTVFWIGFLGDNATWFWTVVKPFILGELKDLLKAGGCSNGSLENQRINFYS
GSGSDEKNSDYSDADTS
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgatgataatttcctttgtccaataccccatgagcacagccctcactttcctccactct
ctctcctcctcccctttccaccaccgtcaccgcccccgcctcttatccacctcatcaccc
ttttcccttcccctaaaacccctttcattttctcccttatccactttaccccaacaagtt
ctgttttcatcccatgaaatccaaggcaataacaatttggacatttcttcatctgtgttt
cctgaaagtttcaattttgacgagtcttttgattctactgagctgaaaaagttcgaaaca
ccggccgttgaagttagtgaactagaggacattcctgatcaatggcgtaggtcaagatta
gcttggctttgtaaggaacttcctgcacataaaacacctactatggttcggattcttaat
gcacagaggaaatggcttaaacaagaagatgctacttacattgctgttcattgtatgcgt
attcgtgaaaatgaagctgcttttcgggtttacaaatggatgatgcagcaacattggttt
cgatttgattttgctctagctacaaagctagcagattacttgggtaaggaacgaaagcac
ttgaagtgccgggagatttttgatgacattattaaccagggacgagtgccgtctgaatct
acattccatattctcatcattgcctatcttagttcacctggcccatcagagttagatgaa
gcgtgtaacatctacaatcgcatggtgcacttgggaggttataagcctcggcttaactta
cacaattctctgtttaaagctcttttggggaagaaaccaggctccagtaaacacttcctg
aaacaggcagaatttatatatcagaatttaacttcctcgggattggatatacacaaagat
atttttggcggtcttatatggcttcacagttatcaggatgtggtggatatggaaagaatt
gctgtgctaagagcagagatgcgatcaagaggaattcaagagagcaaagaggtactcctg
tcagtcttaagagcttgctcaaaggatggggacctggaggaagccgaacgaacttggtca
aaactcctctccgatgatcgtagtcctccttcacaagcttttgtatataaaatggaagtc
tatgcaaagatcggagagcctatgaaatctttggaagtatttaggaggatgcagaaacaa
ctgagttccacctccgttgcagcatactataagataataaaggtgttgtctaaatctcaa
agactagatcttgcagagtctatcatgtccgagttcataaacagtggtatgaagccgctg
attccatcattcatcgatttgatgggaatgtattccattgcaggcttacatgagaaaatg
gagactacctttctccgttgccgtgaagtctgcggtccaaaccagacggtttttaatatt
tatttggattccttggtgcatactggcaatctgaaccgggctgaagaaatcttcaatgaa
atgcgtggtgatgttgcaattagtcttgattctcgttcttgcaacagtattttgagaggc
tatctgacctctggagagtatgcaaaggcagaaaagatatatggtttgatgcgccaaaag
aaatacgacattgagattgaatcttcattgatggaaaaacttgactatgttctaagcttg
cgggagaaagtagttgaagaacctattaagctgaagctcacaaaagaacagcgagaggtt
ttgatggggttgcttcttgggggtttgcaaattagatcatatggagagaggaggaggaga
gtacatgcaatccattttgagttcaatgcagagtcgaggatccacgccattttaaaggga
cacatacacaatgaatttcatcagtggttaggctctcacgatatgatggtggatggcact
gatgatattcctagttcctttactaccatctcacattcttgttttactttctatgctgat
caattctggcccaatggacgtcctggtataccaaaacttatacatagatggctgtcacct
tgtgttcttgcttattggtatatgtatggcggttacaggacatcttctggcgatattcta
ttgagagtaaagggaagtcgagaggaagttttgaatattgttaaagcgctgaaagacaaa
tcattagactgccgagtaaaaaagagggggacggtcttttggattggttttctgggggac
aatgctacatggttctggacagtggtaaagccctttattcttggtgaattaaaggatctc
cttaaagcaggtggctgctcaaatggatccctagaaaaccaaagaatcaatttttacagt
ggttcggggtctgacgagaagaattcagattacagcgatgctgacacgtcatag
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