Nicotiana sylvestris (wood tobacco): 104249123
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Entry
104249123 CDS
T05026
Name
(RefSeq) SWI/SNF complex subunit SWI3C
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104249123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nsy03021
]
104249123
03036 Chromosome and associated proteins [BR:
nsy03036
]
104249123
Transcription machinery [BR:
nsy03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104249123
Chromosome and associated proteins [BR:
nsy03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104249123
PBAF complex
104249123
GBAF(ncBAF) complex
104249123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Amelogenin
Glyco_hydro_9
Pox_Ag35
Motif
Other DBs
NCBI-GeneID:
104249123
NCBI-ProteinID:
XP_009803801
UniProt:
A0A1U7YP89
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Position
6:complement(153495046..153512704)
Genome browser
AA seq
790 aa
AA seq
DB search
MPASSSETRNRWRKRKREPLISRKAKAQQDDDVFEEEDDEEDIDQQEIEDDDHRNPSNSV
DRSNYSVELVSEAGNRISEFPLVVRRTVTRPHSSVLNIVATEKAGQCGESRQNGVVLENM
SYGQLQALSAVPADTPALLTEERGEGSGSGSYVISPPQILQGRGVVKHYGSASRIHVVPM
HADWFSPNTVHRLERQVVPHFFSGKSAEHTPEKYMECRNCIVAKYMELPEKHLSVADCHG
IVAGVSADDVTRIARFLDHWGIINYCAVPPKAEALKDVTLYEDSNSDLCVPVAGLKSIDS
LVQFDKPKCCLKARDVYPELVRDFDDDSDFDNSIREMLSELRCNCCSRPVSLSYYQSQKE
IDILLCLDCFHEGGFVTGHSSLDFVKISSMKDYGDLDGDTWTDQETLLLLEGMQLYNENW
NQIAEHVGTKSKAQCILHFVRLPVDGAPLENIELPGASGPSSSFAGEDRNKSYSNLNGNL
AGPSTENLDSDTKFPFENCGNPVMSLVAFLASAVGPRVAAACAHTSLAALSKDDTLTSRN
MTQIDGSTADNGISVGRIHGKDGSPRGDVGNSYQLKDEKPGGQGPWGQHDAGGAAVSTER
VRAAAKVGLAAAAIKAKLFADHEEREIQRLSANIVNHQLKRLELKLKQFAEVETLLMKEC
EQLERTRQRFAAERARMMTVQPGSVRVSRPIGVSGAGAPVVSNTGNTRQQVASGPLQQSF
ISGYGNNQPMHPHMSFMPQQGMYGFGPRLPLSAIHPSSSTPGMFNAPASSQPALSHSMLR
PVSGTKSGLG
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcttcctcctcagagacgaggaatagatggaggaagcggaagcgggagccttta
atttcaaggaaggccaaggcccaacaagatgatgacgtgtttgaagaagaagatgacgag
gaagacattgaccagcaggaaattgaagatgacgaccaccgaaaccctagcaattcagtg
gatcggagtaattactcagttgaattggtatcagaagctgggaaccgaattagtgagttc
cctttagtagtgagacgtactgttacgcggcctcattcgtccgtcctgaatattgtagcg
actgagaaggctgggcagtgtggagagagtaggcagaatggggtggtgttggagaatatg
tcgtatgggcagcttcaggcgctttcagctgtgcctgcagatactcctgccttgttgact
gaggaaagaggagaaggcagtgggagtggttcgtatgtgatcagtcctccgcagatattg
cagggtcgtggtgtggttaagcattatggcagtgcaagtcgaattcatgttgtgccaatg
cacgcagattggttttcacctaatacagtgcacagattggaaagacaagtggtgccacat
tttttctctggaaagtcagctgaacatacgccagaaaaatacatggaatgcagaaattgt
atagttgcaaagtatatggagttgcctgaaaagcacttgtcagttgctgattgccatggg
attgtagctggtgttagtgctgatgatgtaactcgaattgcaaggtttcttgatcattgg
gggatcatcaactactgtgctgttcctcctaaagcggaggccctaaaagatgtcacattg
tatgaggactcaaacagtgatctctgtgttccagtggctggtttgaagtctattgacagc
ttagtccagtttgacaagcctaaatgttgtctcaaggcgagagacgtttatcctgaactt
gtgcgtgattttgatgatgactccgactttgacaactcaatccgagaaatgttgtctgaa
ctacgatgcaattgttgttctcggcctgtttcactgtcgtactatcagtcacagaaagag
attgatattctattgtgtttggattgcttccacgagggtggatttgtcactggtcactct
agcttggattttgtcaaaataagctctatgaaagattatggagatctagatggagatact
tggactgaccaggaaacgctattgcttctcgagggaatgcaactctacaatgaaaactgg
aatcaaattgcagaacatgttggcaccaagtcaaaggcacagtgcatccttcattttgtc
cgcctgcctgtggatggtgccccattggaaaatattgaacttccaggtgcatctggtccc
tcaagttcttttgcgggtgaagatcgtaacaaatcttattcaaatttgaacgggaatctt
gcaggaccaagcactgaaaaccttgattctgataccaaatttccttttgaaaactgtgga
aatccagtaatgtccctggttgcttttttggcatctgctgtgggaccgagagttgctgca
gcatgtgcccatacttctttggcagcattatctaaggatgatactttaacatcacggaac
atgactcagatagatggatctacagctgataacgggatcagtgtaggaagaattcatgga
aaggatggaagtcctcgtggagatgttggaaattcttatcagctaaaagatgaaaagccg
ggaggacaaggtccatggggtcaacacgatgctggaggtgctgcagtatccactgaaaga
gtaagagctgctgctaaagttggtcttgcagctgcagctataaaggcaaagctttttgct
gaccatgaagaacgtgagattcaacggttatctgcaaacatagtcaaccatcagttaaag
aggttagagctgaagctgaagcagttcgcagaggtggagaccttgttaatgaaagaatgt
gaacaactggagagaacaaggcaacgctttgctgcagagcgtgctcggatgatgacagtt
caacctggttcagttcgagtatcccgaccaataggtgtgtctggtgctggggcaccagtg
gtcagtaacacaggaaatactaggcaacaagttgcttcaggtcctctacaacaaagtttt
atttctggatatggaaacaaccaaccaatgcatccccacatgtcatttatgccgcaacaa
gggatgtatggatttggccctcggctgcctctctcagcgatacacccgtcctcttcaaca
cccggtatgtttaatgctccagcaagttcccagcctgctctcagtcattcaatgcttaga
cctgtatctgggacaaaatctggtttgggttga
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