Nicotiana sylvestris (wood tobacco): 104249422
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Entry
104249422 CDS
T05026
Name
(RefSeq) polygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy00040
Pentose and glucuronate interconversions
nsy01100
Metabolic pathways
Module
nsy_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104249422
Enzymes [BR:
nsy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
104249422
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
104249422
NCBI-ProteinID:
XP_009804151
UniProt:
A0A1U7YQA5
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Position
6:16809751..16813721
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AA seq
401 aa
AA seq
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MYLNFKLSFAFALLFLVHIGESQPAVFDVTKFGAKPDSNEDISKALLSAFKEACNSKIPS
KVVIPKGTYLMNQVRLEGNCKAPIELEIQATLKAPPNPSQLKKDMEWLTINHIDHFTLSG
GGIFDGQGEQGWAQNDCKNSESCGKLPNNLSFNFLTNSIIRDITSLDSKLFHINVLGCKN
LTFIGVNIKAPAQSLNTDGIHVARSRGLNITNSQIGTGDDCISIGDGIQQMYITNVTCGP
GHGISVGSLGKTPGELPVVGVFVQNCTFIDTDNGVRVKTWPASHNGVVRDLHYEDIIVQN
VSNPVVIDQLYCPYNQCKKDLPSQVKISKVSFKNIRGTSRTQDAIKINCSKGVPCEGVEV
GDIDITYNGNEGPAKSTCQNVDPSFVGKQIPPVCAGPAESS
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgtatttgaacttcaaattatcatttgcatttgcacttttatttcttgtgcacatagga
gaatctcaacctgcagtttttgatgtgactaaatttggtgcaaagccagatagcaatgaa
gatattagcaaggctctattaagtgcatttaaggaggcatgcaactcaaaaatcccaagt
aaagttgtgattccaaaaggcacatatttgatgaatcaagtgagactagaaggtaattgc
aaagcccctatagaacttgaaattcaagccactttgaaagctcctccaaatccaagccaa
ctcaagaaagatatggaatggttaactattaatcatattgatcatttcacactatctggt
ggtggaatttttgatggccaaggagaacaaggttgggcacaaaatgactgtaaaaattca
gaaagttgcggtaaacttccaaataatttgagcttcaacttcctaacaaattccataatc
agagacataacttcattggacagcaaactattccacattaatgtgttagggtgcaagaac
ttaacattcattggagttaacataaaagctccagcacaaagcctaaacacagatggtatt
catgttgcaagatcaagaggactcaacattacaaattcacaaattggtacaggagatgat
tgcatatcaattggtgatggaattcaacaaatgtacataacaaatgtaacatgtggacct
ggccatggaattagtgttggtagtcttggaaaaactccaggagaattgcctgtggttgga
gtttttgtgcaaaattgcacatttattgacactgacaatggtgtgagggtgaagacatgg
ccagcttcacataatggtgttgttagagatttgcactatgaggatattattgtgcaaaat
gttagcaatcctgttgttattgatcaactctattgcccttataatcagtgcaagaaagat
ttgccatcacaagtgaagattagcaaagtgagtttcaagaacataagaggaacatcaaga
actcaagatgctataaaaattaattgtagtaaaggtgtgccatgtgaaggtgtggaagtt
ggagatattgacataacctataatggaaatgaagggccagccaagtctacttgccagaat
gttgacccaagttttgtaggcaaacagattccaccagtttgcgctggtcctgcagagtct
tcttga
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