Nicotiana sylvestris (wood tobacco): 104249568
Help
Entry
104249568 CDS
T05026
Name
(RefSeq) SUPPRESSOR OF ABI3-5 isoform X1
KO
K13094
RNA-binding protein 5/10
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nsy03041
]
104249568
Spliceosome [BR:
nsy03041
]
Complex A
Other components
Complex A specific factors
104249568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
OCRE
G-patch
G-patch_2
Zn_ribbon_RanBP
GTP1_OBG
Motif
Other DBs
NCBI-GeneID:
104249568
NCBI-ProteinID:
XP_009804313
UniProt:
A0A1U7YMH9
LinkDB
All DBs
Position
8:195590972..195602662
Genome browser
AA seq
1021 aa
AA seq
DB search
MDPGRYGLHHGWENNSALEGYRGVHEPDFRAGGSYDDGRFLDDRFSRDGVYSRGAYHRDI
LEGEHYPHPPPAVGHWPQTRRRSYEEEYPVERDSRRHEKLFDNYPDAGFDRPARYGGRER
DDYPYDDYDYKHRMAHPNREDNRERDHEYSRYSYDSDYERGSGKDGNWRRRESRERERDK
ESSRERDPSPYRRHEHSRSRSRGRDDRMRSRSPRSRSHSRSHREDSYDDGRYDRSERRRD
RDDKRYHDNYSVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGVSRGFA
FIDFPSVGAAQAMMDKLGDEGLVVDGRKLFFEYSSKPTGGPGGPGSLDSASRSNHGNHRS
ITVPSDWMCTICGCVNFARRTSCFQCNEPRTDDAPPADMASSNSSSLGRRGEAGPTHVLV
VRGLDENADEEMLRYEFSKHAPIKDLRLVRDKFTHVSRGFAFVHFYSVEEATKALEATNG
TTLEKNGQILRVAYAKSILGPGSNASQTSSLAAAAIEAATFAQQYDAVGWAPKEYNPDDK
LSTGGQERSGEVAGQNSAPQSGFVWDEASGYYYDAASGFYYDGNTGLYYDGNNGIWYTYD
QKTQQYVPCTNHNDTKAAEGQTETTKSSDGSNTKKVVISAPAIVVAGEKASSLPDAIQAA
ASAAIAAEKKEKEKAKEIKLASKSSILANKKKMNNVLSMWKQRSHEGQAPRVALEDNQTV
GEDRSNSVGPAAKTKLKAEPLTARENATASPGLAGNSTFQSVSFESPDKPRSVTNSSGGT
LKGVIRGSGLGVVKSDTLYTGSSGSSSTSHTMPPSTAPSLTNADASAAPFRTDASALGSY
MPPVPAGGGKRRFSEMPSQPPSTKEQSQTTTAYRDRAAERRSLYGSSSAFGDDASDLGDS
NRDSTSRRGVFDPTPFPPGVGGGRSAEANSQSFEVISADRAIDESNVGNRMLRNMGWQEG
LGLGKDGSGMVEPVQAQASERRAGLGIHQPKKVDPNLEVQAGDSYKTLIQKKAIARFREM
S
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggatcctggtcgatatgggctccatcatggatgggaaaataacagcgctttggagggt
tatagaggagttcatgagccagatttccgggctggtggttcttatgatgacgggaggttt
ctagatgatagattttcgagggatggtgtttactcacggggtgcctatcaccgtgatata
ctggaaggagagcactaccctcatccgccaccagcagttggacattggcctcaaacaagg
agaagaagttatgaagaagagtatcctgtggagagagattccaggaggcatgagaagctt
tttgacaactaccctgatgctggatttgacaggcctgctaggtatgggggacgcgagcgt
gatgactacccctatgatgattatgactacaaacatcgtatggcgcacccgaacagggag
gataaccgtgaaagggaccatgagtacagtagatatagttatgactcagactatgaaaga
ggcagtgggaaagatggtaattggagacgacgtgaatcccgtgagcgtgaacgtgacaaa
gaatcgagtcgtgagagggatccgagtccatatagaagacatgagcattcccgctcacgt
tctcgtggtcgtgatgatcgcatgaggtcaagatctcctcgaagtcgaagtcatagtcgc
agtcatagagaggacagttatgatgatggccgatacgatagaagtgagagacgaagagat
cgtgatgataaaagataccatgacaattattctgtggccccttcagcgactgttgttgtc
aaaggcctttcacagaaaacgaccgaagaagatttgtatcagatccttgctgagtggggg
cccctacgccatgttcgtgtgatcaaagaacgaaattctggcgtttctcgcggatttgcc
tttattgatttcccttctgtgggtgcggcgcaagcaatgatggataaacttggggatgag
ggtctagttgtggatggtaggaagcttttcttcgagtacagtagcaagccaactggagga
cccggtgggcctggtagtctagacagtgcttcaagatctaaccatggtaaccaccggagt
atcactgttccatctgattggatgtgcaccatctgtggatgtgtgaattttgcacggcgg
acatcttgttttcagtgtaatgagccacggacagatgatgctcctccagcagacatggca
tcatccaactctagctctctggggaggagaggcgaagcaggtcccacacatgtcttagtt
gtccgtggattagatgaaaatgcagatgaggagatgcttcgttatgaattttccaaacac
gctcctattaaggatcttcgtcttgtcagagacaagttcactcacgtctcgaggggattt
gcatttgtgcacttctattctgtggaggaagctactaaagctcttgaagcaacaaacggt
acaacattggagaagaatgggcagattcttagagttgcatatgcaaaaagtatccttgga
ccaggatcaaatgcttctcagactagtagccttgcagctgctgctattgaagcagcaact
tttgctcaacagtatgatgctgttggatgggcaccaaaagaatataatcctgatgataaa
ctgtcaactggtggacaagagcgcagtggagaagttgctggtcagaattctgctccacaa
tctggatttgtctgggatgaagcttctggctattattatgatgctgcttctggtttttat
tatgatgggaatacaggtttgtattatgacggtaacaatgggatctggtatacttacgac
cagaaaactcagcaatatgtaccatgtaccaatcacaatgacaccaaagcagcagaggga
caaactgaaactaccaaatcatctgatggctcaaacactaagaaagttgttatatctgca
ccagctattgtagtagctggtgagaaggcttcctcactacccgacgctatccaggctgct
gcctctgcagcaatagctgctgaaaagaaagagaaggagaaggcaaaagagataaaactt
gcctcaaaaagcagcatccttgccaataagaagaaaatgaataatgtattatcaatgtgg
aagcaaagaagtcatgaaggtcaagctccccgcgtggcgcttgaagacaaccagacagtg
ggtgaagacagatctaactcagtaggacctgcagcgaaaaccaagttaaaagctgagccc
ttgactgctagagagaatgctacagctagtccaggacttgcaggaaactcaacttttcag
tctgtgagttttgagtctccggataagcctaggtctgtgactaacagctctgggggcact
ttgaagggcgtaataagaggttctggtttaggagttgtgaaatcggataccctgtataca
ggatcatctggaagttcatccacctcacataccatgccaccaagcacagctccctcatta
acaaatgcagatgcctctgcagcgccctttaggacagatgcatctgctttgggttcttat
atgcccccagtaccagctggaggtggtaaaagaaggttctcagagatgccatcgcagcct
ccatctactaaggagcagtctcaaactacaactgcataccgagatcgtgctgctgagcgg
aggagcttgtatggttcatcttcagcctttggagatgatgcatcagatcttggagattca
aatcgagactcaacatctagaagaggtgtttttgatccaacacctttcccacctggtgtt
ggaggtggacgtagtgcagaagcaaatagtcagagctttgaggtgatctctgctgaccgg
gctatcgacgagagtaatgtgggcaaccgtatgctccgcaacatgggatggcaggagggc
ttgggattggggaaggatggaagtggtatggtagagccagtccaagctcaagcatctgaa
cgtagagcaggacttggaattcatcagcccaagaaggttgacccaaaccttgaagtacag
gctggtgacagttacaagactctcatacaaaagaaggccattgctcggttcagagagatg
tcgtaa
DBGET
integrated database retrieval system