Nicotiana sylvestris (wood tobacco): 104249672
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Entry
104249672 CDS
T05026
Name
(RefSeq) oligouridylate-binding protein 1B-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsy03019
]
104249672
03041 Spliceosome [BR:
nsy03041
]
104249672
Messenger RNA biogenesis [BR:
nsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
104249672
Spliceosome [BR:
nsy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
104249672
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_DEAH11
Motif
Other DBs
NCBI-GeneID:
104249672
NCBI-ProteinID:
XP_009804449
UniProt:
A0A1U7Z0K9
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Position
3:188621387..188626815
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AA seq
418 aa
AA seq
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MLNQRLKQEQQAALMQQALLQQQSLYHPGLLAAPQIPSGNLPPGFDPSTCRSVYVGNIHP
QVGETLLQELFSCTGPVEGCKLVRKDKSSYGFVHYYDRGSAELAIATHNGRHLFGQPIKV
NWAYASGQREDTSGHFNIFVGDLSPEVTDAMLFACFSVYPSCSDAKVMWDQTTGRSRGFG
FVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGANANDDKQGSDAKSIVELTHGSSEE
GKEPENGDAPENNPQYTTVYVGNLAPLVTQLDLHRHFYALGAGVIEEVRVQRDKGFGFVR
YSTHDEAALAIQIGNAQSILCGRQIKCSWGNKPTPPGTASNPLPPPAAAPLGLSATDLLA
YERQLAISRMAGVHSLMQPQGQHPLKQASMGMGASGASQAIYDGGFQNVAAQQLMYYQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatcagaggttaaagcaagaacagcaagcagccttgatgcaacaagctctgctt
caacaacagtccctttatcatcctggcctcttagctgctcctcagataccaagtggaaat
ctacctcctgggtttgatccaagtacatgccgcagtgtgtatgtcgggaatattcatcca
caggtgggtgaaactcttcttcaggaacttttttcatgtactggtccggttgaagggtgc
aaacttgtaaggaaggacaagtcatcttatggttttgttcattactatgatcgaggatca
gctgaacttgctatagccactcacaatggaaggcacctgtttgggcagcctatcaaagtt
aactgggcctatgccagtggacagagggaggatacttcaggtcacttcaatatatttgtt
ggcgatttgagcccagaagttactgatgccatgttgtttgcttgcttctctgtttaccct
agttgctctgatgctaaggtaatgtgggatcaaactactgggcgttctaggggttttgga
tttgtttctttccgcaatcaacaggatgctcaaagtgcaatcaatgatttaactgggaaa
tggcttggtagtagacagatacgttgtaactgggccacaaaaggtgccaatgctaatgac
gacaagcagggatcagatgccaaaagtatcgtggaattaactcatggatcatcagaagag
ggtaaagagccagaaaacggcgatgctcctgaaaacaacccacaatatacaactgtttat
gtgggtaatcttgctcctctggtgacacaactcgatctccatcgccatttttatgccctt
ggtgcaggagtgatagaggaagttcgggttcaacgtgataaaggatttggttttgtgaga
tacagcacccatgatgaggcagctttggcgattcaaattggaaatgctcaatcaattctg
tgtggtagacagattaagtgttcttggggtaacaaaccaactccacctggaacagcctcg
aatcctctcccaccgccagccgctgcaccattaggcctctctgcgactgaccttttggct
tatgaacggcagctagctattagcaggatggctggtgtccattccctcatgcaaccccag
ggtcaacatcctctgaagcaagcatcaatgggaatgggtgcctctggagcaagccaggct
atttatgatggtggtttccagaatgttgctgcccagcagctcatgtattatcagtga
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