Nicotiana sylvestris (wood tobacco): 104249723
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Entry
104249723 CDS
T05026
Name
(RefSeq) exosome complex exonuclease RRP46 homolog
KO
K12590
exosome complex component RRP46
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104249723
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsy03019
]
104249723
Messenger RNA biogenesis [BR:
nsy03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
104249723
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
104249723
NCBI-ProteinID:
XP_009804503
UniProt:
A0A1U7YN30
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Position
8:complement(160609807..160616172)
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AA seq
243 aa
AA seq
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METDRKDGRTANQLRPLACTRNVLNRAHGSASWSQGETKVLAAVYGPKAGTKKNENPEKA
CFEVIWKPKTGQIGKAEKEYEMILKRTVQSICVLNVHPNTTTSIIIQVVNDDGALLPCAI
NAVCAALVDAGIPLKHLAVAICCSLAESGHILLDPSKLEEQKMKAFVYLVFPNSTLSVLP
EESLKVRGEPMEHGLITSFTHGVMSVDDYIRCLERGRAATGKLSDFLRRSLQSQVQSDSS
KLG
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggaaacagataggaaggatgggcgaacagcgaaccaattgagaccgttggcttgcact
cgtaacgttcttaatcgtgctcatggctctgccagttggtctcaaggggagacaaaagtt
cttgccgctgtttatggaccaaaggctggaacaaagaagaacgagaacccggaaaaggcc
tgctttgaagtcatttggaagccaaaaacggggcagattggtaaagcggagaaggagtat
gagatgattttgaagaggactgtgcaaagcatttgtgttttgaatgttcatccaaatacc
accacgtcaattatcattcaggttgtcaacgatgatggagctcttcttccatgtgccata
aatgcagtatgtgctgcccttgtggatgctgggattcctttgaagcaccttgctgttgca
atatgttgtagtctagcagagagtggacatattctactggaccctagcaagctagaagag
cagaaaatgaaggcgtttgtatatctagtttttcctaactcgacattatctgtgcttcct
gaagaatcattgaaagtgagaggtgaacccatggaacatggacttataacatcttttaca
cacggtgtaatgtcagttgatgactacattcgctgtttggagcgaggacgtgctgccact
ggaaagttgtccgattttctccggagaagcttgcaatcacaagtccaaagtgactcatcc
aagttgggttaa
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