KEGG   Nicotiana sylvestris (wood tobacco): 104249870
Entry
104249870         CDS       T05026                                 
Name
(RefSeq) putative lysine-specific demethylase JMJ16
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:nsy01009]
    104249870
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:nsy03036]
    104249870
Enzymes [BR:nsy01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     104249870
Protein phosphatases and associated proteins [BR:nsy01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     104249870
Chromosome and associated proteins [BR:nsy03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    104249870
SSDB
Motif
Pfam: JmjC FYRC JmjN zf-C5HC2 FYRN KDM5_C-hel
Other DBs
NCBI-GeneID: 104249870
NCBI-ProteinID: XP_009804681
UniProt: A0A1U7YKT6
LinkDB
Position
4:13946823..13956184
AA seq 1254 aa
MGTELVRHCVKEEDMDISSIPPGFESLAPFTLRKVDNNRLTINQPSSVSESKSHGSRIEA
YIEGTEDGKMIKSLRRKPGINYGKYEKSSEDESEPEQNPFVRPSLPKGVIRGCEACLNCQ
RVTARWRPEEACRPDLEDAPVFYPTEEEFEDTLTYMASIRTKAEAYGICRIVPPASWKPP
CPLKEKYIWENSKFATRIQRIDKLQNRNSMRKMWKVNHHKKKKRRRCSKTGVDLGNGSVD
IRTPDEAAIFEERFGFEPGPEFSLDAFQKYADDFKAQYFRQNEGQCEPSLENIEGEFWRM
VEKPTEEIEVLYGADLETGVFGSGFPKHGHQVGSSDPKYVNAGWNLNNFPRLPGSVLTYE
SSDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHFGAPKMWYGVPGADALKLEAAMR
KNLPDLFEEQPDLLHKLVTQLSPSILKSEGVPVYRCVQNPGEFVLTFPRAYHAGFNCGFN
CAEAVNVAPVDWLPHGQNAIELYREQGRKTSISHDKLLLGAARDAVKAHWELNLLRKNTS
TNLRWKDVCGKDGILSKALKNRVEMERVRREFLCNSSQALKMESTFDATNERECSVCFFD
LHLSAAGCHHCSPDKYACLNHAKQLCTCSWGAKFFLFRYDINELNVLVDALEGKLSAIYR
WARQDLGLALSSYVNKERQVAGLVGKLSCKTEVPVLKETITGSPIASIKKEKDDGNANLL
TRASDITLSLHKNKQSREPLALESIKASSMPDNSSHGIKGAKNGFQSKSEESVKLVPDNR
APVLALESIKASSTAGNSSHGIKGPKNGIQRKSEESIKLVPGYRNTVCQLSVEGGSCSKK
LPTDKHEAKGSSGLGDGDVILLSDDEGEEMNRSVLLGDTVDKRTMSMGSSAKPVSTTSIN
DEKVTGDRISGSSSSESIKVEDNAKDLIHQRLDQETHSSLGGSSVIMDLDKHAQGSQATK
GTSGCSIILRDADACPKPPQPCDSKPNKEDNQNKETECPQPLSSDSPVSQNNLDRYFRQK
GPRIAKVVRRINCNVEPLDYGVVQPGKLWCDNRAIYPKGFRSRVRYIDVLDPANMCYYVS
EVLDAGRDGPLFMVSLEHCSNEVFVHLSAVRCWDMVRERVNQEITKQHKLGKLKLPPLQP
PGSLDGMEMFGFSSPAIIQVIQAMDQNQVCSEYWKSRPMMQRAPSASVNGLKLNIKSEIS
NDLAGADTVLSGLIKKANSEELHALYTLLKTNNLTPNQGLMTRLLNEEIDKRGR
NT seq 3765 nt   +upstreamnt  +downstreamnt
atggggactgaacttgttagacattgtgtcaaagaggaggatatggacatttcatcaatt
ccgcctggttttgagtcacttgcacccttcaccttaagaaaggtggataataatagactc
acgattaatcagccatcctcagtgagcgaatcaaaatcgcatggaagtcggatagaagca
tatattgaaggtaccgaagatggaaagatgattaagtcacttaggcgtaaacctgggata
aactacgggaagtatgagaaaagctcagaagatgaatccgaacccgaacagaatcccttt
gtaaggccgtcacttccaaaaggagtcatccgtggatgtgaagcgtgtctcaattgccaa
agggtaactgcgagatggaggccagaggaagcttgtaggcctgatctcgaggatgctccg
gtgttctatccaactgaagaggaatttgaagataccctgacatatatggctagcatacgc
accaaagcagaggcatatggaatttgtcgcatagtaccgcctgcttcatggaaacctcca
tgccctcttaaggaaaaatatatatgggagaactccaaatttgctacccgtatacagagg
attgacaaacttcagaatcgaaattcgatgagaaagatgtggaaagttaatcatcataag
aagaagaaaagaagaagatgctcaaaaaccggagtagacttgggtaatggtagtgttgac
attaggacccctgatgaagctgctatttttgaggagaggtttggatttgaacctggtcca
gagtttagtctggacgcatttcagaaatatgctgatgattttaaggcccagtacttcagg
cagaatgaagggcagtgtgagccttcattggagaacattgagggtgaattttggcggatg
gtcgagaaacctactgaagagatcgaggttctttatggggctgacttggaaactggagta
tttggcagtgggttccctaaacatggccatcaagttggctcttctgacccgaagtatgta
aacgcaggatggaacttaaataacttccctaggcttccaggttctgttcttacatatgag
agcagcgacatatctggtgttttggtgccttggctttatataggaatgtgcttttcatca
ttctgttggcatgttgaagatcaccatttgtactcattaaattatatgcattttggggct
ccaaaaatgtggtatggtgtgcctggagcagatgcgttgaaattggaggctgctatgagg
aagaacttgcctgatctctttgaagagcagcccgacctgcttcacaagctggttacacaa
ctatctccctcaatattgaagtctgagggagttccagtttatcggtgtgtccaaaatcct
ggagagtttgttttgaccttcccaagagcttatcatgctggtttcaattgtggcttcaat
tgtgctgaagcagtaaatgttgctcctgtcgattggttacctcatgggcagaatgcgatt
gagctttaccgtgagcagggccggaaaacttccatatcccatgataaactgttactgggg
gcagctcgagatgcagtcaaagcacactgggaacttaatttactgaggaagaatacctca
actaatttacgatggaaagatgtttgtggaaaagatggaattttgtcaaaagcactaaag
aaccgtgttgagatggagagagtgaggagggagtttctttgcaattcttcacaggcacta
aagatggagagcacttttgatgctactaatgagagggaatgtagtgtatgttttttcgat
ctacacctgtccgccgccggctgtcatcattgttcgccggataaatatgcatgcttgaac
catgcaaaacaactgtgcacttgttcctggggtgccaaatttttcctcttccgttatgac
atcaatgagttaaatgtactagttgacgctttagaagggaaattgagtgcaatttatcga
tgggccaggcaagatcttggattggctttgagttcttacgtaaacaaagagaggcaagtt
gcagggcttgttggtaagttatcctgtaaaactgaggtaccggtgctaaaagagacaatc
acaggatcccctatagcttccataaaaaaggaaaaggatgatggaaatgcaaatctcttg
acaagggccagcgatattactttatcattgcataaaaataaacaatccagggaaccatta
gctttggaatcaattaaggcatcctctatgcctgacaactcttctcatggaattaaggga
gcaaagaatggcttccagagcaaaagtgaagaatctgtaaagttggttcctgataataga
gctccagttttggctttggaatcaatcaaggcatcctctaccgctggcaattcttctcat
ggaattaaggggccgaagaatggcatccagaggaaaagtgaagaatccataaagttggtt
cctggttatagaaatacagtttgtcaactttctgtggagggtgggtcatgtagtaagaaa
ttaccgacagataagcatgaagcgaagggctcttcaggtcttggtgatggtgatgtgatc
cttctcagtgatgatgagggagaggagatgaacagatcagttcttttgggagatactgtg
gataaacgtacaatgagcatgggtagcagtgctaaacctgtctcaacaacatccattaat
gatgagaaggttaccggagacagaattagtggttcatctagttcagagagcataaaagtt
gaggataatgcaaaagatttaatacatcagagacttgatcaagaaacacattcttccctt
ggaggttcttctgtaattatggatcttgataaacatgcccaaggttctcaggctacaaaa
gggacttctggatgtagtatcattttaagagatgcagatgcttgtcccaagcccccacag
ccatgtgactctaaaccaaataaagaagataaccaaaataaggaaacggagtgtccacaa
cctttatcaagtgactctcccgtctctcaaaacaatttggacagatattttcgtcagaaa
ggtcctcgtattgcaaaagtcgtgaggagaatcaattgcaatgtggaacctctagattat
ggagttgttcagcctggcaagctatggtgcgacaatcgggctatttaccccaagggattc
aggagccgggtcagatatattgatgttttagatccagcaaatatgtgctactacgtttct
gaagttctggatgcagggcgagatgggccattgtttatggtctcgttagagcattgttcg
aatgaagtttttgttcatttatccgctgtcagatgctgggacatggtccgggagagagtg
aatcaagaaataacaaagcaacataagttgggaaaactgaagcttcctcctttgcagcca
cctggaagtcttgatggcatggaaatgtttggtttttcttcacctgcaattatacaggta
attcaagctatggatcaaaatcaagtgtgttcagaatattggaaatctcgacctatgatg
cagagagcaccatccgcatctgttaacggtttgaaactcaatataaaatccgagatctca
aatgatcttgccggagctgatacagtactcagtggcctgattaagaaggcaaactctgaa
gaacttcatgcattgtacacacttctcaaaaccaataatttgacccctaatcaaggttta
atgactcggcttcttaacgaagagattgataagcgaggaagatga

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