Nicotiana sylvestris (wood tobacco): 104250056
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Entry
104250056 CDS
T05026
Name
(RefSeq) uncharacterized protein
KO
K23288
syndetin
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nsy04131
]
104250056
Membrane trafficking [BR:
nsy04131
]
Protein recycling
Others
EARP complex
104250056
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Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
104250056
NCBI-ProteinID:
XP_009804892
UniProt:
A0A1U7YLE4
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Position
11:127037137..127060471
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AA seq
1100 aa
AA seq
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MQSNSSSSSSAPPFPLIPLVLLNGGQGQLSEGGFELSRFLFLGSLLFSSQGAGYGDGGMD
LSKVGEKILSSVRSARSLGLLPSSSDRPEVPERAAAAAALARVLAGLPPHQRHALSSSSE
ELSSIYGSKPPGQVVEELEEEFYEEEFDPVGHILEHIPSEDGELAYLEEQAALRLAQLDR
ISERLSRHVMEHHEVMVKGMDLVRQLERDLKIANVICMNGRRHLTSSRNEVSRDLIVSTN
SKRKQALLDVLPFLNELRHALDMQSTLETLVEEGRFSKAFQVLSEYLQILDTLSELSAAQ
EMSRGVEVWLGKTLQKLDSLLLGVCQDFKEENYVTVVDAYALIGDVAGLAEKIQSFFMQE
VLSETHSVMKTTVQEDLETNVQSRLTYSDLCTQIPESKFRQCLLATLAVLFRLMCSYHAI
QSFQPEDKDDILSPSIERAPILSSVEDPLPTSAVSSDTAMHGSSNINYRVEEARDDGSTA
SSSGSPWFQLRKDATTFVSHTLLRGRKNLWQLTTSRAAVLLSSPAIHSASIHQFLITYED
LNIFVLAGEAFCGSKAVEFRQKVKSVCESYLAAFHRQNIYALKMVLEKENWLILPPETIE
VVSFAGLVGDGAALIVSSETSPNARLPRKSVHPIQTDSKRNGFSTWLKGGNPFMPKLNGS
SKEYLDSCLLNGSATQESGNSNEDSFDKSSSLTNSDVNHVNGNASLSEDENEDLHADFID
EDSQLPSRIAKPGHSRNRSSHWNNEQIKAQTGSSLSLLRLLDKYARLIQKLEIVNVEFFK
GFCQLFGIFFHFVFETFGQQGTHPSGKAVTDTLSYRLKTALSRITQDCDQWMKPQSQSFS
SSPPSSSSTSFSHMDVTPTSPPSYLTGASLGLKERCAGADTIYVVARLLHRSKAHLQSML
LQNNGALVEDFYVHLVDAVPDLVDHIHKTTARLLLHINGYVDRIANAKWEVKELGVEHNG
YVDLLLGEFKHYKTRLVHGGIQKEVQDLLLEYGVDNVAEVLVEGLSRVKRCTDEGRALMS
LDLQVLINGLKHFICVDVRPKLQIVETFIKAYYLPETEFVHWARAHPEYSKGQIVGLINL
VSTMKGWKRKTRLEVLEKIE
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcaaactcttcttcttcttcttctgctccgccttttcctttaattccactggtt
cttttaaatgggggtcaaggtcaattgagcgaaggtgggttcgagttatctaggtttttg
ttcttaggttctttgctcttctcttctcaaggagctggctacggcgacggtggtatggac
ttgtctaaagttggagagaagattttgagttccgttcgctccgctagatctcttggcctc
ctcccttcttcttccgatcgtcctgaggttcctgaacgagctgcagccgctgctgcactt
gcacgtgtgctagctggactacctccacatcagagacatgctctgtcatcaagctcagag
gaattgagctctatatatgggagcaaacctcctggtcaagttgtcgaggagctggaggaa
gaattctatgaagaggaatttgatcctgtcggacatattctggagcatattccatctgaa
gatggtgaactagcttacttggaagaacaggctgctcttagattagcacagctggacaga
atttctgaacgcttgtcacgccatgttatggagcatcatgaagtaatggtgaagggaatg
gatcttgtccgacaactggaaagagacttgaagattgcaaatgtcatatgcatgaatggt
cgcagacatttaacttcttcaaggaacgaggtgtcaagggatctcattgtctccactaat
tctaaaagaaaacaagcactgttggatgtgcttccgttcctgaatgagctgcgtcatgca
ctcgacatgcaatcaactcttgaaactcttgttgaggaaggaagattctcaaaggcgttc
caagtactatcagaatatttacaaattttggacacactttcggagctttctgctgcacaa
gagatgagccgtggggttgaggtttggctagggaagactctacaaaagttggattcactt
ttactaggagtgtgccaggatttcaaagaggagaactatgtaactgtagttgatgcttat
gcgcttattggagatgttgctggccttgctgagaagatacagagtttctttatgcaggag
gttctatctgaaacccactctgtgatgaagactaccgtacaagaggatttggaaaccaat
gtgcaaagcaggctcacatatagtgatctgtgcacccagatacccgaatccaagttcagg
caatgcttgttagcaacactagctgtactttttaggttgatgtgttcatatcatgcaata
cagagcttccagccagaggataaggatgatattttgtcaccaagcatagagagagcgcca
attttatcctccgttgaagatccactacctacttctgctgtttcatccgacactgcaatg
cacggttcgtccaatataaattatagggttgaagaggcaagggatgacggaagcacagca
tcaagcagtggatccccctggtttcagctaaggaaagatgccacgacctttgtttcacat
acattactcaggggtcgaaagaatctttggcaacttacaacaagtcgtgcagctgtattg
ctttcttcacctgctattcattctgctagcatccatcaattcttaataacttatgaagat
ttaaacatttttgtacttgctggggaagcattttgtgggagtaaagcagttgagttcagg
cagaaagtcaaatctgtttgtgaaagttatttagctgctttccatcggcaaaatatttat
gctctcaagatggtgctggaaaaggagaattggctgatattgccaccggagacaatagaa
gtagtaagctttgctgggcttgttggtgatggagcagctttgatagtttcatccgaaacc
tctcccaatgctcgactgccacgtaaatctgtacatcctatccaaactgactctaagagg
aatggattttcaacttggctcaagggcggaaacccatttatgccaaaactaaatggtagt
tcgaaggaatacttggactcttgtttgcttaatggatctgcaacgcaagaaagtggaaac
tccaatgaggattcttttgataagagttcttctttgacaaacagtgacgtaaatcatgtc
aatgggaatgcttctttatctgaagatgaaaatgaagatcttcatgctgattttattgac
gaagatagccaactacctagccggattgctaaacctggtcactcaagaaatcgctcttca
cattggaacaatgaacaaataaaagcgcaaacaggatcatcacttagcctcctgaggtta
ttggataaatatgcgaggttgattcagaagttagagattgttaatgttgagttttttaag
gggttttgccaattgtttgggatcttctttcactttgtctttgagacctttggtcagcaa
ggtactcatcctagtggaaaggctgtgactgacactctgtcgtataggcttaagactgca
ttatcacgaataacacaggattgtgaccaatggatgaaaccccagtctcaatcattttcc
tcctctcccccctcaagctcgagcacatcattttctcacatggatgtcactcctaccagc
ccgccaagctacttaactggtgcatccttgggacttaaggaaagatgtgcaggtgctgac
actatatatgtcgttgctcggttattgcatagatctaaagcacatcttcagtcaatgctt
cttcaaaataacggggcactggttgaggatttctatgtgcatttggtggatgctgtaccg
gaccttgtagatcatattcataaaacaactgctagattacttctccacataaatgggtat
gttgatcgaattgccaatgctaaatgggaggtgaaagagcttggagtagagcacaatgga
tatgtagatcttttgcttggagaatttaagcattataaaacaaggcttgttcatggagga
attcagaaggaggttcaagacctcctcttagaatatggagttgataatgttgctgaagtt
ctcgttgaaggcctatctcgggtgaagaggtgtactgatgaaggacgagctcttatgtca
ttagatcttcaggtattgataaacggcttgaagcatttcatctgtgtcgatgtgaggcct
aaattgcagatagttgaaacattcatcaaggcctactaccttccggaaaccgagtttgtg
cactgggcacgtgctcatccggaatacagtaaaggtcagattgttggtctaatcaaccta
gtctctacaatgaaaggctggaaaagaaaaaccaggttggaagttttggaaaagattgag
taa
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