Nicotiana sylvestris (wood tobacco): 104250118
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Entry
104250118 CDS
T05026
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy00040
Pentose and glucuronate interconversions
nsy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104250118
Enzymes [BR:
nsy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104250118
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
104250118
NCBI-ProteinID:
XP_009804979
UniProt:
A0A1U7Z0S1
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Position
12:73424113..73428346
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AA seq
402 aa
AA seq
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MGIPIIFLLLVALLAPLFTFSTPVPDPEVIVQEVNDKIFNASRRNLGYLSCGTGNPIDDC
WRCDPNWEKNRQMLADCAIGFGKQAIGGRDGKIYIVTDTSDDPVNPKPGTLRYGAIQNEP
LWIIFGRDMVIKLKEELMLNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKQ
GGNAYVRDSPEHYGWRTLSDGDGVSIFGGSHVWVDHCSLSNCRDGLIDAIRGSTAITISN
NYMTHHNKVMLLGHSDSFTRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE
MYAVGGSASPTINSQGNRFLAPNDIFNKEVTKHEDAPESEWKTWNWRSEGDLMLNGAFFT
RSGAGASKSYAKASSLSARPSTLVSSITLNAGALGCKKGKRC
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgggaataccaattatcttccttctccttgttgctcttttagctcctctcttcacattc
tcaacccctgttcctgaccctgaagttatagtccaagaagttaatgacaaaattttcaat
gcatcaagaaggaacttaggctatttatcatgtggaacaggcaaccctattgatgattgc
tggagatgtgacccaaattgggaaaaaaacaggcaaatgttagctgattgtgccattgga
tttggcaaacaagccattggtggaagagatggtaaaatttacatagtcactgatactagt
gatgatcctgtaaatccaaagccaggaactttaagatatggtgctattcaaaatgaacca
ctttggattatatttggtagagacatggttattaagctaaaagaagagttaatgctgaat
tcattcaagactattgatggtagaggtgctagtgtacacattgctggtggtccatgtatt
actatacaatatgttacaaatattattatacatggattaaatattcatgattgtaaacaa
ggaggaaatgcttatgttagagattcaccagagcattatggttggaggacattatcagat
ggagatggagtttctatatttggaggaagccatgtttgggttgatcattgttctttgtca
aattgtagagatggcttgattgatgcaattcgtggatctactgccattactatttccaat
aattacatgacacatcataataaggtaatgcttttgggacatagtgattcattcactagg
gacaagaacatgcaagttaccattgcttttaaccattttggagaagggcttgtacagaga
atgccaagatgtagacatggatatttccatgtggtgaacaatgactacactcattgggag
atgtatgcagttgggggaagtgcttctccaactatcaacagccaaggcaatagatttctt
gctcctaatgatatcttcaacaaggaggtgacaaaacatgaagatgcaccagaaagtgaa
tggaagacttggaactggagatctgaaggagatttaatgcttaatggagctttctttact
aggtctggtgctggagcttctaaaagttatgccaaagcttcaagtttaagtgcaaggcca
tctactttagttagctctattaccctcaatgctggtgcacttggctgcaagaagggcaaa
agatgctga
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