Nicotiana sylvestris (wood tobacco): 104250135
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Entry
104250135 CDS
T05026
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy00040
Pentose and glucuronate interconversions
nsy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104250135
Enzymes [BR:
nsy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104250135
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
104250135
NCBI-ProteinID:
XP_009804999
UniProt:
A0A1U7Z0U4
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Position
9:60819037..60824807
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AA seq
439 aa
AA seq
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MAVSWRSCLSLLVVIMLAINNVTASTSPEEAKQFQSLNNSTMANRLNEENVPNHEKHAVD
DPDMVASMVDMSIRNSTERRKLGFFSCGTGNPIDDCWRCDRNWQRNRKRLADCAIGFGRN
AIGGRDGKYYVVTDPGDDDPVNPRPGTLRHAVIQDRPLWIVFKRDMVITLKQELIMNSFK
TIDGRGVNVHIANGACITVQFVTNIIIHGINIHDCKPTGNAMVRSSPGHYGWRTMADGDA
ISIFGSSHIWVDHNSLANCADGLIDAIMGSTAITISNNYFTHHNEVMLLGHSDSYVRDKI
MQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTINSQGNRYLAPA
NPFAKQVTHRVEPSEGEWKRWNWRSDGDLMLNGAYFTPSGRGAGASYARASSLAAKSSSL
VGTLTSSAGALTCRRGRQC
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggcggtctcttggagatcatgtctatcattgctagttgtgataatgctagccatcaat
aatgtcactgccagtaccagtcctgaagaagcaaagcaatttcagagcttaaacaactcg
acaatggcgaacaggttaaacgaagaaaatgtaccaaaccatgaaaaacatgctgttgat
gatccagatatggttgcttccatggtagacatgagcattcggaatagtacagagaggagg
aaattgggttttttctcatgtggaactggaaatcctattgacgattgctggcgctgtgac
cgcaattggcaacgtaaccgcaagcgcctagccgattgtgctattggatttggacgcaat
gccattggtggccgcgatggcaagtactacgttgtcactgacccaggtgacgatgacccc
gtaaatcccagacctggaacacttcgtcatgctgtaattcaggacagaccattgtggatt
gtgtttaaacgggacatggtcattacacttaagcaagagcttataatgaacagtttcaag
acaattgatggacgtggtgtgaatgttcatattgccaatggggcttgcataactgtccaa
tttgttactaatatcattattcatggcatcaatattcatgattgtaaaccaactggtaat
gccatggttcgtagctcgccaggtcactatggttggaggacaatggctgatggtgatgcc
atttccatctttgggtccagccacatttgggttgaccacaactctctcgctaactgtgct
gatggcctcattgatgctatcatgggatcaactgcaattaccatctccaacaattatttt
acccatcacaatgaggtgatgctattgggtcacagcgactcctatgttagagacaagatt
atgcaagtgactattgcctacaaccattttggtgagggtctcattcagagaatgccaagg
tgtagacatggttatttccatgtggtgaacaatgactatacacactgggagatgtatgct
attggtggcagtgcttctcctacaattaacagccaaggcaacagataccttgccccagcc
aacccatttgccaaacaggtgacacatagagtggaaccatcagaaggagagtggaagcgt
tggaactggagatcagatggagaccttatgcttaatggagcctactttaccccatccgga
cgtggtgctggagccagttatgctagggcatcaagcttagcagccaagtcctcttcacta
gttggcactcttacctcaagtgctggtgcacttacctgccgcaggggccgccaatgttaa
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