Niveibacterium terrae: ACHFB9_00650
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Entry
ACHFB9_00650 CDS
T11146
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
ntb Niveibacterium terrae
Pathway
ntb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ntb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
ACHFB9_00650 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ntb03400
]
ACHFB9_00650 (sbcB)
Enzymes [BR:
ntb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
ACHFB9_00650 (sbcB)
DNA repair and recombination proteins [BR:
ntb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
ACHFB9_00650 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ACHFB9_00650 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACHFB9_00650 (sbcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
CBP110
Motif
Other DBs
NCBI-ProteinID:
XPC81361
LinkDB
All DBs
Position
143474..144916
Genome browser
AA seq
480 aa
AA seq
DB search
MADLSFYWHDYETFGVQPRRDRPAQFAGIRTDAELNEIGEAKMIYCQPAPDYLPDPESCL
LTGILPQICLERGLPEHAFAAAIAHEMALPGTVGLGYNTLRFDDEVTRHLFWRNLIDPYA
REWQNECGRWDLLDVVRCMYALRPDGIVWPKHEDGRPSFKLEHLSAANGLLHEAAHDALS
DVRATIALARLIRGLQPRLWDFCLKLRKKDAVLAEIDPANPRPFLHISGMFGPERGCIAI
VWPLGVHPTNKNELIVWDLAQDPAELFALDAAAIRERLFVRTEDLPEGVSRLPIKTIHIN
KSPIVIANLRTLSPAIAEKWGIDFDLALQHAGIARRGPNLNALWREVFVRPASDQRADVD
EDLYGGFVGNNDRRLLEHLRSMTPDALAAERVSFSDSRLEELLFRYRARNFPATLSEAEL
GRWKEHRVATLHRGGGGGRTLNAFFDRIDELSETADERGEAILGALYDYAELIAPPLEDL
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggccgacctcagcttctactggcacgactacgaaacttttggcgttcagccgcggcgc
gatcgcccggcgcagttcgccgggatccgcaccgacgccgaactcaacgagatcggcgag
gcgaagatgatctattgccaaccggctcccgactacctgcccgatccggagagttgcctg
ctgaccggaatcctgccccagatctgccttgaacgtgggctgcccgagcacgcttttgcg
gcggcgatcgcgcacgagatggctctgccgggaaccgtgggactcggttacaacacgctg
cgtttcgatgacgaagtcacccgtcacctgttctggcgcaacctgatcgacccctatgcg
cgcgaatggcagaacgagtgcgggcgctgggatctgctcgacgtggtccgctgcatgtat
gcgctgcgccccgacggcatcgtctggcccaaacacgaggacggtcggccttccttcaag
ctcgagcacctgtccgccgcgaacggccttcttcacgaagcggcgcacgatgcgctgtcc
gacgttcgcgcgacgatcgctctggcccgcttgatccgcggccttcagcccaggctatgg
gatttctgcctgaagctcagaaagaaggatgcggtactcgccgagatcgatccggcgaat
ccccggcccttcctgcacatctccgggatgttcgggcctgagcgtggctgcatcgcgatc
gtttggcctctgggcgtgcacccgaccaacaagaacgagctcatcgtctgggatctggct
caggatccggccgaactctttgcactcgatgcggcggcgatccgcgagcgcctgttcgtc
cgaaccgaggatcttcccgaaggcgtgagccgtttgccgatcaagacgatacatatcaac
aagtcgccgatcgtgatcgccaacctgaggactctgtcgccggcgatcgccgagaagtgg
ggaatcgatttcgatctggcgctgcagcatgctggaatcgcccggcgcggtccaaatctc
aacgcgctttggcgggaagtgttcgtccgtccggcgagcgatcagcgcgccgatgtggac
gaggatttgtacggcggctttgtcggcaacaacgatcgccgcctgctcgaacatctgcgc
tcgatgacgccggatgcactcgcggcggagcgggtcagtttcagcgattcacggctcgaa
gagctgcttttccgctatcgtgcccgcaatttcccggcgactttaagcgaggccgagctt
gggcgttggaaagagcaccgggtcgcgactttgcatcgcggaggaggtggggggaggacg
ctgaacgctttcttcgaccgcatcgatgaactgagcgagacggcggatgagcgcggtgaa
gcaatcctcggcgcgctctacgattatgcggagcttattgcgcccccgctggaggatctg
tag
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integrated database retrieval system
