Niveibacterium terrae: ACHFB9_09105
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Entry
ACHFB9_09105 CDS
T11146
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ntb Niveibacterium terrae
Pathway
ntb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ntb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ACHFB9_09105 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ntb03400
]
ACHFB9_09105 (recD)
Enzymes [BR:
ntb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ACHFB9_09105 (recD)
DNA repair and recombination proteins [BR:
ntb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ACHFB9_09105 (recD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
SH3_13
NAT10_TcmA_helicase
AAA_22
UvrD-helicase
AAA_28
SLFN-g3_helicase
UvrD_C
nSTAND3
AAA_17
PhoH
T2SSE
NTPase_1
AAA_16
Motif
Other DBs
NCBI-ProteinID:
XPC82982
LinkDB
All DBs
Position
1970012..1972060
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AA seq
682 aa
AA seq
DB search
MTPVLNQAGLSDLLERWSDQGWLRAIDTAFAAFLLRESPDAHPLLILAAALASHQLGRGH
ACLDLAGTIKDPELALSLPPEGAAGEGEAPPLPSQVLSSLTVEAWLAALANPDLVGTGPG
NTPLVLAGQRLYLRRYWQYEESVRLWVESRLATPIPLPQARLKAALDGLFPPGAAGPDWQ
KLACALSARSAFSVITGGPGTGKTTTVVRLLALLQALALDAGQPLRIRLAAPTGKAAARL
NESISGAVAKLKLDALGDGEALRAAIPVAVTTLHRLLGSRPDTRHFRYNAGNRLPLDLLV
VDEASMMDLEMMAALLEALPDPARLVLLGDKDQLASVEAGAVLGVLCARALEGHYTSATA
AWLKEVTSDALAPELIDPAGGLLDQAVAMLRFSHRFGEKSGIGQLAAAVNAGDAGAVRHV
FAAGHTELGRIPAAEQELKALVIDGAKPGAHGYRHYLETISNTRPVPGASQQALDGWASE
VLAAHSEFQLLCALRRGPWGVEGLNASIAGWLHQESLIAEVEGWYAGRPVLVTRNDYGLG
LMNGDIGITLALPSKQGEVLRVAFPAEGGGIRWVQPSRLQAVETVYALTVHKSQGSEFAH
VALVLPEHINPILTRELVYTGITRARKFFTLAEAGGDGVLGGAIARQVLRASGLVFQAPG
RCHQNETIECEHREFSQTSLFE
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgactccagtattgaaccaggccgggctcagcgacctgctcgaacgctggtcggaccag
ggctggctgcgcgcgatcgacaccgctttcgcggccttcctgctccgcgagtcacccgat
gcccatccactgctgatcctcgccgcggcgctggcgagccaccagctcgggcgcggtcat
gcctgcctggatctggcgggcacgatcaaagatccagagctggccctgtcgctgccgccc
gagggcgcagccggggagggcgaagcgcctcctctgccttcgcaagtgctctccagcctc
acggtcgaagcctggctcgccgcgctcgccaatcccgatctggtcggcaccgggcccggt
aacacgcctctggtgctcgccggccaacgcctctatctgcgccgctactggcagtacgag
gagtcggtcaggctgtgggtcgagagtcggctcgccacgcccatccccttgccacaggcc
agactcaaggcggctctggacggcctgttcccgcctggcgcggcgggaccggactggcag
aagctggcctgtgcgctctccgcgcgcagcgctttttcggtgatcaccggcgggccggga
accggcaagacgacgacggtagtgcgcctgttggccctgctgcaggcgctggctctggat
gccggccagcctctgcgcatccgtctcgctgcgccgaccggcaaggccgcggcgcggctg
aacgaatcgatctccggcgctgtcgcgaagctcaagctcgatgcgctgggagatggcgaa
gcgctgcgtgcggcgatcccggtcgccgtgacgactctgcaccggctgctcggcagccgt
ccggacacccggcacttccgctacaacgcgggcaatcggctgccgctggaccttctggtc
gtcgatgaagcgtcgatgatggatctggagatgatggcagcgcttctcgaagcgctcccc
gatccggcgcgcctcgtgctgctcggcgacaaggatcagctcgcctcggtcgaggccggc
gccgtgctcggcgtgctctgtgcgcgcgcgctcgaaggccactacacgagcgcgacggct
gcctggctcaaggaagtgaccagcgatgcgcttgcgcccgagctgatcgaccccgcgggc
ggactgctcgatcaggccgtcgcgatgctcaggttcagccaccgctttggcgagaagagc
ggcatcggtcagctcgccgcggcggtcaatgccggcgatgccggcgccgtgcgccacgtg
ttcgcggccggccacaccgagctggggcgaatcccggcggcggagcaagagctcaaggcg
ctggtcatagatggcgcaaagccgggcgcgcacggctatcgccactatctcgagacgatt
tcgaatacgcgtcccgtgccgggcgcctcgcaacaggcgctggacggctgggcgagcgag
gtgctcgccgcgcacagcgaattccagttgctctgcgcgctgcgccgcggtccatggggc
gtagaggggctcaacgcgagcatcgccggttggctccatcaagaatcgctgatcgctgag
gtcgaaggctggtatgccggccgccccgtgctggtgacccgcaacgactatggcctgggg
ctgatgaacggcgatatcggcattacgctggcgctgccttccaagcagggggaggtgctg
cgcgtcgctttcccggccgagggcggaggtatccgctgggtccagccgagccggctccag
gctgtcgagaccgtctatgcgctgaccgtccacaaatcccagggttcggagttcgcgcac
gtcgcgttggtcctgcccgagcacatcaacccgatcctgacccgcgagctggtctatacg
gggatcacccgggcgcgcaaattcttcacgctggccgaagcggggggcgatggagtgctg
ggcggggcgatcgcccgacaagtattgcgcgccagcggcctcgtttttcaggcgcccggg
cggtgtcatcagaatgagacgatagaatgcgagcatcgcgagttttcgcagacctccctc
tttgaatga
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