Niveibacterium terrae: ACHFB9_13780
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Entry
ACHFB9_13780 CDS
T11146
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ntb Niveibacterium terrae
Pathway
ntb03030
DNA replication
ntb03430
Mismatch repair
ntb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ntb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACHFB9_13780 (dnaE)
03430 Mismatch repair
ACHFB9_13780 (dnaE)
03440 Homologous recombination
ACHFB9_13780 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ntb03032
]
ACHFB9_13780 (dnaE)
03400 DNA repair and recombination proteins [BR:
ntb03400
]
ACHFB9_13780 (dnaE)
Enzymes [BR:
ntb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACHFB9_13780 (dnaE)
DNA replication proteins [BR:
ntb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACHFB9_13780 (dnaE)
DNA repair and recombination proteins [BR:
ntb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACHFB9_13780 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
XPC80416
LinkDB
All DBs
Position
complement(2968718..2972224)
Genome browser
AA seq
1168 aa
AA seq
DB search
MSETSFPSHAPRYVHLRMHTEFSIEDGIVRVDDAIDAAAADNMPALGISDLANIFGLLKH
YKGGRGAGVKPICGADVWITNDAERDKPHRLMLICKHREGYGQLCEILTRSFLENKHRGR
AEVRREWLAPEQVSGLICLSGAQLGDIGAALAAGNGDSARRLAADWAERFPDSFYIEVQR
AGHPGTETYIREAVTLANELALPVVATHPIQFLHREDFKAHEARVCIAKGYVLSDKRRPK
DFTEEQYFKSQAEMVELFADLPEALENSVEIARRCSLSIVLGKNFLPQFPTPEGMTLDDF
LIDEATKGLEERLAHLYPDPEVREKEKPRYYERLKFETDTIVQMGFPGYFLIVADFIQWA
KNNDVPVGPGRGSGAGSLVAYSLKITDLDPTAYALLFERFLNPERVSMPDFDVDFCQDNR
YRVIEYVRERYGRDAVSQIATFGTMASKAVVRDVGRVLDLPYGLCDRLSKLIPVVQNKPL
GLVEAKEQEPAIGEMMADPGDGESITELWELALPLEGMTRGVGMHAGGVVIAPGKLTDYC
PLYLADGDDAVPVSQFDKGDVEAVGLVKFDFLGLRNLTIIKLALDYVERLTGERVDLMSL
GFEDPAAYQILKDANTTAIFQLESEGMKKLLTKLAPDRFEDIIAVLALYRPGPLGSGMVD
DFILRKKGEQEIDYFHPDLEACLSPTYGVIVYQEQVMQISQIIGGYTLGGADMLRRAMGK
KKKEEMDKHRSTIAEGAKKKGYDPALAEHLFDLMTKFAEYGFNKSHTAAYAVVTYHTAWL
KVHHCAAFMAATMSVDMDNTDTVKIFFEDTLANRVAILPPDINASEYKFEPTDAKTIRYG
LGGVKGVGEPAVRSILAARSADGPFKDLFDFCKRIDRRAVNRRSVEALIRAGAFDSLDDH
RARLIASVGIAMDWAEQEASHAGQGGLFDAPDMAAEQMPQMVEVKRWGERQQLKEEKTAI
GFFLSGHPYHAFKAEVGRFIRTPLSRLEPRREPQNFAGIVAGVRTKIGNRGKMMFVQLDD
GTAQHEVAVFSEVLEANKDKIVIDEVLIVEAKVSHDDFSGGLRIVAESLMTLGEARARYA
RALVLRMDETLIAEQGARPVAEQLQGLLGAYRADPEVGYGCPVRIDYKTAKARADLPLGG
TWRVRLEEPLLEGLRDWLPPEQVEILYA
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaacgagcttcccttcgcatgcgccgcgctatgtgcacctgcgcatgcacacc
gaattttcgatcgaggacgggatcgtccgggtcgatgacgcgatagacgcggccgccgcc
gacaacatgccggcgctgggtatttccgacctcgccaacatcttcggcctgttgaagcac
tacaagggcggccggggcgcgggcgtcaagccgatctgcggcgccgacgtctggatcacc
aacgacgcggagcgggacaagccgcaccggctgatgctgatctgcaagcaccgcgagggc
tatggccagctctgcgagatcctgacccgctccttcctcgagaacaagcatcgcggtcgc
gccgaggtccggcgcgagtggctcgcgcccgagcaggtttccgggctgatctgcctgtcc
ggcgcccagctcggcgacatcggcgccgcgctcgcggccggcaacggcgattcggcgcgc
cggctcgccgccgactgggcggagcgctttccggacagcttctacatcgaagtgcagcgc
gccggtcaccccggcaccgagacctatatccgcgaggcggtgacgcttgccaacgagctc
gcgctgccggtcgtcgcgacccacccgatccagtttctccaccgcgaggacttcaaggcg
cacgaggcgcgcgtctgcatcgccaagggctatgtgctgtccgacaagcgccgcccgaag
gacttcaccgaggagcagtacttcaagagccaggccgagatggtcgaactcttcgccgat
ctgcccgaggcgctcgagaactcggtcgagatcgcgcgtcgctgctcgctgagcatcgtg
ctgggcaagaacttcctgccgcagttcccgacgcccgaaggcatgacgctggacgacttc
ctgatcgacgaggcgacgaaggggctggaggagcggctcgcccacctctatccggatccg
gaagtccgcgagaaggaaaagccccgctattacgagcggctcaagttcgagaccgacacg
atcgtccagatgggcttcccgggttacttcctgatcgttgcggacttcatccagtgggcc
aagaacaacgacgtgccggtggggccgggccgcggctccggtgccggctcgctggtcgcc
tattcgctgaagatcaccgacctcgatccgaccgcctatgcgctgctgttcgaacgcttc
ctgaaccccgagcgcgtgtcgatgcccgacttcgacgtcgacttctgtcaggacaaccgc
tatcgcgtgatcgagtatgtccgcgagcgctacggtcgcgatgcggtgagccagatcgcg
accttcggcacgatggcctcgaaggccgtcgtccgcgacgtcggccgcgtgctcgacctg
ccttatggtctgtgcgaccggctctcgaagctgatcccggtcgtccagaacaagcctctg
ggcctcgtcgaagcgaaggagcaggagccggcgatcggcgagatgatggccgatccgggc
gatggcgagtcgatcaccgagctgtgggagctcgcgctgccgctcgaaggcatgacccgc
ggcgtcggcatgcacgccgggggcgtcgtgatcgcgccgggcaagctgaccgattactgc
ccgctctatctcgccgacggcgacgatgcggtgccggtctcgcagttcgacaagggcgac
gtcgaggcggtcggcctcgtcaagttcgacttcctgggtctgcgcaacctgaccatcatc
aagctggcgctggactatgtggagcggctgaccggcgagcgcgtcgatctgatgagtctg
ggcttcgaggacccggcggcctaccagatcctgaaggacgcgaacacgaccgcgatcttc
cagcttgaatcggagggcatgaagaagctgctgaccaagctcgctcccgaccgcttcgaa
gacatcatcgctgtgctcgcgctctaccggccggggcctctgggctcgggcatggtggat
gacttcatcctgcgcaagaagggcgagcaggagatcgactacttccaccccgacctcgaa
gcctgtctgtcgccgacctatggcgtcatcgtctatcaggaacaggtgatgcagatctcg
cagatcatcgggggatacaccctcggtggggcggacatgctgcgccgggcgatgggcaag
aagaagaaggaggagatggacaagcaccgcagcacgatcgctgagggtgcgaagaagaag
ggctacgacccggcactggccgagcacctcttcgacctgatgaccaagttcgccgagtac
ggcttcaacaagtcgcacacggcggcctatgcggtggtcacctaccacacggcctggctg
aaggttcaccactgcgcggccttcatggccgcgacgatgtcggtggacatggacaacacc
gacacggtcaagatcttcttcgaagacacgctcgcgaaccgcgtcgcgattttgccgccg
gacatcaatgcgtcggagtacaagttcgagccgaccgatgcgaagacgatccgctatggc
ctgggcggcgtcaaaggcgtcggcgagccggcggtccgttccatcctcgcggcccgttcg
gccgacggcccgttcaaggatctgttcgacttctgcaaacgcatcgaccgccgcgcggtc
aatcgccgctcggtcgaagcgctgatccgcgccggcgccttcgacagcctggacgatcac
cgcgcccggctgatcgcgagtgtcggtatcgcgatggactgggccgagcaggaagcgtcc
cacgccgggcagggcggtcttttcgatgccccggacatggcggccgagcagatgccgcag
atggtcgaagtcaagcgctggggcgagcggcagcagctcaaggaggagaagaccgcgatc
ggcttcttcctgtccggccacccctatcacgctttcaaggccgaggtcgggcgcttcatc
cgcacgccgctctcgcgcctggagccgcgccgcgaaccgcagaacttcgccggcatcgtc
gccggagtccgcaccaagatcggcaaccgcggcaagatgatgttcgtccagctcgacgac
gggacggcccagcacgaagtcgcggtgttctcggaagtgctcgaagcgaacaaggacaag
atcgtcatcgacgaagtgctgatcgtcgaagcgaaggtcagccatgacgacttctcgggc
ggcctcaggatcgtcgccgagagcctgatgacgcttggcgaggcgcgggcccgctatgcg
cgggctctggtgctgaggatggatgagacgttgatcgccgagcagggcgcgcgcccggtc
gctgagcaactgcagggcctgctcggcgcttatcgggcagatcccgaagtcggctacggt
tgtccggtccggatcgactacaagaccgcgaaggcccgggccgatctgccgctcggcggc
acttggcgggtcaggctcgaagaacccttgctcgaagggctgcgcgactggctcccgccc
gagcaggtcgagattctctatgcctga
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