Niveibacterium terrae: ACHFB9_15350
Help
Entry
ACHFB9_15350 CDS
T11146
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ntb Niveibacterium terrae
Pathway
ntb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ntb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACHFB9_15350 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ntb03019
]
ACHFB9_15350 (pnp)
03016 Transfer RNA biogenesis [BR:
ntb03016
]
ACHFB9_15350 (pnp)
Enzymes [BR:
ntb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACHFB9_15350 (pnp)
Messenger RNA biogenesis [BR:
ntb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACHFB9_15350 (pnp)
Transfer RNA biogenesis [BR:
ntb03016
]
Prokaryotic type
tRNA degradation factors
ACHFB9_15350 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH_SLS1_2
KH_2
aRib
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
XPC80704
LinkDB
All DBs
Position
complement(3307285..3309399)
Genome browser
AA seq
704 aa
AA seq
DB search
MPTPTKKSFAFGANTVTLETGEIARQAHGAVKVSMDDTVVLATVVAARDPKPGQDFFPLT
VDYVEKFYAAGRIPGGFFKREGRATEKETLTSRLIDRPIRPLFPEGFYNEIQVVVTVMSL
DPEIDADIPAMIGASAALALSGVPFNGPIGACRVGYADGQYLLNPTATQLKTSELNLVVA
GTEVGVMMVESEANVLSEEVMLGAVVYGHQQMQTAIQAINELADEAGKPEWDWKAPEPNE
ALIAKVKEIAGAQIEEAFQITAKLQRNDRLSAIRKELVAALVTGEQGAPTETEIKDIFFG
LESAVVRNRILSGQPRIDGRDTRTVRPISIRTGVLPRTHGSALFTRGETQALVIATLGTG
RDEQVIDAIAGEYKERFMLHYNMPPYATGETGRMGAPKRREVGHGRLAKRALLAALPAYS
DFGYTVRLVSEITESNGSSSMASVCGGSLALMDAGVPLKAPVAGIAMGLIKEGNRFAVLT
DILGDEDHLGDMDFKVAGTEEGVTALQMDLKIDSISPAIMQKALDQAREGRMHILGLMKA
SVEGHRTELSEFAPRMIQMKINPEKIRDVIGKGGAVIRALTEETGTVIDIQDDGTVTIAS
TDSSKADLAKKRIEEIAAEVEVGKIYEGPVVKILEFGAIVNIMPGRDGLLHVSQIANKRV
EHVTDYLKEGQVLRVKVLETDERGKIRLSLKAVQDIEPLAAAQQ
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
ttgcctactccgaccaagaaaagcttcgcctttggcgcgaacacggtcactctggaaacc
ggcgagatcgcccgtcaggcgcatggcgccgtgaaggtctcgatggacgacaccgtggtt
ctggccaccgtcgtcgctgcccgggatccgaagcccggtcaggacttcttcccgctgacc
gtcgattacgtcgagaagttctacgcagccggccggattcccggtggcttcttcaagcgc
gaaggccgcgcgaccgaaaaggaaacgctgacctcgcgtctgatcgatcgtccgatccgc
ccgcttttccccgaagggttctataacgagatccaggtcgtcgtgaccgtgatgtcgctc
gatcccgagatcgatgcggacattccggcgatgatcggcgcttccgccgctctggctctg
tccggcgtgccgttcaacggcccgatcggtgcctgccgcgtcggctatgcggacggccag
tatctgctgaacccgaccgcgacccagctcaagaccagcgaactgaacctcgtcgtcgcc
ggtactgaagtcggcgtgatgatggtcgaatcggaagcgaatgttctgtccgaggaagtg
atgctcggcgccgtcgtctacggccaccagcagatgcagaccgcgatccaggcgatcaac
gaactggcggatgaagccggcaagcccgaatgggactggaaggcgcctgaacccaacgaa
gcgctgatcgccaaggtcaaggaaatcgcgggtgcccagatcgaggaagctttccagatc
accgcgaagctgcagcgcaacgaccgtctgtccgcgatccgcaaggaactggttgcggct
ctggtgaccggcgagcaaggcgccccgaccgaaaccgagatcaaggacatcttctttggt
ctcgaatctgcggtcgtccgcaaccgcatcctgagcggccagccccgtatcgacggtcgc
gatacgcgcaccgttcgcccgatcagcatccgcaccggcgtgttgccccgcacccacggt
tccgcgctcttcacccgcggcgaaacccaggccctggtcatcgcaaccctgggtaccggg
cgcgacgaacaggtcatcgacgcgatcgctggcgagtacaaggagcgcttcatgctccac
tacaacatgcctccgtatgcgaccggtgaaaccggccgcatgggcgctccgaagcgccgc
gaagtcggtcatggccgtctcgccaagcgtgctctgctcgccgctctgccggcctacagc
gatttcggctacacggtccgcctcgtctccgagatcaccgaatcgaacggttcgagctcg
atggcgtcggtctgcggtggttcgctggctctgatggatgcgggcgttccgctcaaggca
ccggtcgcgggtatcgcgatgggcctgatcaaagaaggcaaccgcttcgcggtgctgacc
gacatcctcggcgacgaagaccacctcggcgacatggacttcaaggtcgcaggtaccgaa
gagggcgttaccgcgctgcagatggacctgaagatcgactcgatcagcccggcgatcatg
cagaaggctctggatcaggctcgtgaaggccggatgcacatcctcggcctgatgaaggcc
tcggtcgaggggcaccgcaccgagctgtccgagttcgctccgcgcatgatccagatgaag
atcaacccggagaagatccgcgacgtgatcggcaagggcggcgcggtgattcgtgcgctg
accgaagagaccggcaccgtgatcgacatccaggatgacggcacggtcacgatcgcctcg
accgacagctcgaaggctgatctggcgaagaagcgcatcgaagagatcgctgcggaagtc
gaagtcggcaagatctacgaaggtccggtcgtcaagattctcgaattcggcgccatcgtc
aacatcatgccgggccgcgacggactgctgcacgtctcgcagatcgccaacaagcgcgtc
gagcatgtcaccgactatctgaaggagggccaggttctccgcgtcaaggttctcgaaacc
gacgagcgcggcaagatccgcctgagcctgaaggccgttcaggacatcgagcccctggct
gccgcccagcagtaa
DBGET
integrated database retrieval system
