Niveibacterium terrae: ACHFB9_15360
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Entry
ACHFB9_15360 CDS
T11146
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ntb Niveibacterium terrae
Brite
KEGG Orthology (KO) [BR:
ntb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ntb03016
]
ACHFB9_15360 (truB)
Enzymes [BR:
ntb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ACHFB9_15360 (truB)
Transfer RNA biogenesis [BR:
ntb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ACHFB9_15360 (truB)
Prokaryotic type
ACHFB9_15360 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
XPC80706
LinkDB
All DBs
Position
complement(3309861..3310796)
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AA seq
311 aa
AA seq
DB search
MAKQSWLTIDGVVLLDKPVGLSSNTALQKVRRAYRAAKGGHTGTLDPLASGLLPLCLGEA
TKFSQMLLDADKAYVAHVRLGETTTTGDAEGEILVRSELRPTEANIDAVLPRFLGEIEQI
PPMYSALKRDGKPLYEYARAGVELVRAPRQVRILSLVRGALDGQEFDLAVACSKGTYIRT
LAEDIGAALGCGAHITALRRTRIGPFLIEGAVGLEALESDSALREAALKPVDLLAGHLPV
VELDEDQCRRFAHGQSVTLPAFEPGEARIYRRERFLGLGRCEANGTLVPVRLVAERASSA
QMLDVQENSPL
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcagtcctggctgaccattgacggagtcgtactcctcgataagcccgtgggc
ctctcgtcgaacacggcgctgcagaaagtccggcgcgcctaccgggcggccaaggggggg
cataccggcactctggatcctctggcctccgggctgctgccgctgtgcctcggagaggcg
acgaagttcagccagatgctcctcgatgccgacaaggcctatgttgcccatgttcgcctc
ggtgagacgacgacaaccggggatgccgaaggcgagatcctcgtccgcagcgagctgcgg
ccgaccgaagcgaatatcgatgcggtgctgccgcgcttcctcggcgagatcgagcagatt
ccgccgatgtactcggccttgaagcgcgatggcaagccgctctacgaatatgcgcgggcc
ggagtcgaactcgtgcgggctccgcgtcaggtgaggatcctgtcgctcgtgcgcggcgca
ctcgacggtcaggagttcgatctcgcggtcgcgtgcagcaagggaacctatatccgcacg
ctcgccgaggatatcggggcggccctgggctgcggcgcgcacatcacggcgctgcgccgg
acccggatcggccccttcctgatcgagggcgcggtcgggctggaagcgctggagagtgat
tctgcgctgcgtgaagccgcgctgaagcccgtggatctgctggccgggcatttgccggtc
gtcgagctcgacgaagatcagtgtcgccggtttgcgcacgggcagtctgtgactctgccg
gcgttcgaacccggtgaagcgaggatttatcggcgcgaacgctttctggggctggggcgc
tgcgaggcaaacgggacgctggttccggtccgtctggtcgccgagcgcgcttcatctgcg
cagatgcttgatgttcaagaaaattcgccgctataa
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