Niveibacterium terrae: ACHFB9_16630
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Entry
ACHFB9_16630 CDS
T11146
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ntb Niveibacterium terrae
Pathway
ntb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ntb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACHFB9_16630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ntb03019
]
ACHFB9_16630
03009 Ribosome biogenesis [BR:
ntb03009
]
ACHFB9_16630
Enzymes [BR:
ntb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACHFB9_16630
Messenger RNA biogenesis [BR:
ntb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACHFB9_16630
Ribosome biogenesis [BR:
ntb03009
]
Prokaryotic type
rRNA helicases
ACHFB9_16630
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
AAA_22
DUF2582
YmjE
Motif
Other DBs
NCBI-ProteinID:
XPC80950
LinkDB
All DBs
Position
complement(3594120..3595979)
Genome browser
AA seq
619 aa
AA seq
DB search
MTENSESTETFASLGLSSPLLAALTVLGYETPSPIQAACIPHLLAGSDVLGEAQTGTGKT
AAFALPLLERLDLASSKPQVLVLTPTRELAIQVAEAFQSYARQLKNFHVLPIYGGQSMVV
QLRSLARGAQVIVGTPGRVMDHLERESLKLDDLRALVLDEADEMLRMGFIDDVEWILKHT
PESRQTALFSATMPDAIRRVARQYLREPKEVKIRAATSTVATISQRYWQVRGTDKINALT
RILEVEDDFDAAIVFVRTKTATVEVAEKLEARGYAVAALNGDMTQGLREQVIDRLKSGSL
DMIVATDVAARGIDVPRISHVINYDIPYDTEAYVHRIGRTGRAGRQGTAILFVAPREFRM
LRAIERATRQPITPINLPSREDVADRRVAQFKQQILDALGNEELAFFTDVVAEIEQENEL
SGREVAAALAWLAQKDKPLQLDPREYPDLPVAQERSERAPRENRGEILERRRAFSDGKLA
KYRIEVGRAQGASPKEIVGAIANEGGIEGRFIGQINLFSDFSTVELPVDLPESVLATLRQ
TRVCQTRLNIRAFADGEAVPEREHRSRPAREGGRDFHRERGDFGDKPFRKGPSSFGKKPD
GFAKKPSGFAKKPKKPQSF
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaaattccgaatcgaccgagacttttgcaagtcttggtctctcctctcccctt
ctcgcggcgctgaccgtgctcggctatgaaacgccgtccccgattcaggccgcctgcatt
ccgcatctgcttgccggctccgacgtgctcggcgaagcgcagaccggaaccggcaagacc
gccgctttcgcgctgcccctgctcgaacggctggatctggcgagcagcaagccgcaggtt
ctggtcctgactccgacgcgcgagctggcgatccaggttgccgaagccttccagagctat
gcgcggcagctgaagaacttccacgtgctgccgatctacggcggacagagcatggttgtg
cagctgcgcagtctcgcgcgcggtgcccaggtcatcgtcggcactccgggccgcgtcatg
gaccacctggaacgggaaagcctcaagcttgacgatctgcgcgcgctggtgctcgacgaa
gccgacgaaatgttgaggatgggcttcatcgacgacgtcgaatggattctcaagcacacg
ccggagagtcggcagaccgcgctgttctcggcgacgatgccggacgcgatccgccgcgtc
gcgcgtcaatacctgcgcgaacccaaggaagtgaagatccgcgccgcgacttcgacggtc
gcgacgatctcgcagcgctactggcaggtgcgcggcaccgacaagatcaacgcgctgacc
cgcatcctcgaagtcgaggacgatttcgacgcggcgatcgtgttcgtccgcaccaagaca
gcgaccgtcgaagtcgccgaaaagctcgaagcccgcggttatgcggttgccgcgctcaat
ggcgacatgacccagggcctgcgcgagcaggtcatcgaccggctcaagagcggctcgctg
gacatgatcgtcgcgaccgacgtcgctgcgcgtggcatcgacgtgccgcggatctcgcat
gtgatcaactacgacatcccctacgacaccgaagcctatgtgcaccggatcggccgcacc
ggccgcgcgggacgtcagggcacagcgatcctgttcgtcgcgccgcgcgaattccggatg
ctgcgtgcgatcgagcgggcgacgcgccagccgatcacgccgatcaacctgcccagccgc
gaggacgtcgccgatcgccgcgtcgcgcagttcaagcagcagatccttgatgcgctcggc
aacgaagagctcgcgttcttcaccgatgtcgttgccgagatcgagcaggagaacgagctg
tccggccgggaagtcgctgcggctctggcctggcttgcccagaaggacaagcctctgcag
ctcgacccccgcgaataccctgatctgcccgtcgcccaggagcgcagcgagcgcgcaccg
cgcgagaatcgcggcgagatcctcgagcgtcggcgggctttttccgacggcaagctcgcg
aagtaccggatcgaagtgggccgcgcccagggcgccagcccgaaggagatcgtcggtgcg
atcgcgaacgaaggcggaatcgaaggccgtttcatcggccagatcaacctgttcagcgac
ttcagcaccgtcgaactgccggtcgatctgcccgagagcgttctggcgacgctgcgccag
acccgggtctgccagaccaggctgaacatccgcgctttcgctgacggagaggcggtgcct
gagcgcgagcaccgcagtcgtcccgcgcgcgaaggcgggcgggacttccaccgcgagcgc
ggggactttggcgacaagcccttcaggaaagggccgtcgagctttggcaagaagccggac
ggtttcgcgaaaaagccttccggcttcgcgaagaagccgaagaagccacaatcgttctga
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