Nocardia tengchongensis: KHQ06_02465
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Entry
KHQ06_02465 CDS
T07484
Name
(GenBank) winged helix-turn-helix domain-containing protein
Organism
ntc
Nocardia tengchongensis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTAD
AAA_22
Trans_reg_C
TPR_12
NB-ARC
UPF0261
Motif
Other DBs
NCBI-ProteinID:
QVI24593
LinkDB
All DBs
Position
complement(555144..558293)
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AA seq
1049 aa
AA seq
DB search
MLGPLEIRTEDGGSLDVPGVRLRALLIALALEPGRAVAKTTLVDWIWGERPPADAANALQ
ALVSRLRKVLPDGVIDVQPGGYRLAVEPRAVDAVRFEQLLEAARGGAEAQRVQPLREALE
LWRGAPLQDIGAQENAAIDAVITRFEGLRLAAAEDLYETEIRLGRGAALVAELTELVDRN
PVRERLADALMRALAAAGRGAEALTVYQRTREALADELGVDPSPELSALHVALLRGEVGA
QREEDRRTNLRAELTSFVGKRADIAAVRELVAAHRLTTVTGPGGSGKTRLATETGRALLA
ELPDGAWLVELAATGSSGDLAQSALAALGLRDALLGGAPNAEPIDRLIAAVRERDMLLIL
DNCEHVIESAAAFAHRMLGECRRLRILATSREPLGITGEALWQVEPLALPAGNADAAEIE
SSPAVQLLRDRASAVRKDLASDARSLATMARVCRALDGIPLAIELAAARLRTMSLEQLAD
RLDDRFRLLTGGSRTAIPQHRTLRAVVDWSWELLTDAERRVLRRLAVFSGGASLEAAEQV
CAAAEFGADAAVEQWEVLELLTALTEKSLLRTAGDDEPRYRMLDTIKQYAHDRLVEAGES
DAARRAHLAYVTGLAATAEPHLRRAEQVQWLAVLDAEHDNIAAAMRGALAAGDAPGALGL
AAAAGWYWWLSGHKAEGLELVSAAAALPDETVDAETRATVYGLVVHFVTSGPGDQHQVEE
WIHKASRVSQGIRTSHPALAFLGALERMLQGPDQFLPAFEALLDDEDPWVRALARLQTGK
LRVVLGQDGEAADEQLELALAEFRAIGERWGMSFALTELADRIAMRGEFGRACAYFEQAV
AAATEVGAVEDAVRMRARQAQLYWLLGDFDASAVALAEAQRYADQAAWPSGLAELALVKA
ELARWNGDGAETRRQIAVATAMLGEEAGQPFISALIHDLRGYLAEDPGEARTERAAAFAA
ATAGGHAPLLARIIVGIADLALRDGQDEQAVRLLAAGDAVRGLADRSHPDVARIEQTTRS
RLGEDGFTEAAGEGTRADWHELAQVTLAC
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgcttggaccgctcgagatccgaaccgaggacggtggatcgctggacgtgccgggtgtc
cggttgcgggcgttgttgatcgcgctcgcgctcgaacccggccgcgcggtcgcgaaaacc
acgctggtcgactggatctggggtgagcgcccgcccgcggacgcggcgaacgcgctgcag
gcgctcgtctcccggctgcgaaaggtgctgccggacggggtgatcgacgtgcagcccggc
ggctaccggctggcggtggaaccccgcgccgtggacgccgtccggttcgagcagctgctg
gaagcggcccgtggcggcgcggaggcgcagcgggtgcagcctctgcgcgaggccctggaa
ctgtggcgcggcgcgccgttgcaggacatcggcgcccaggagaacgcggccatcgacgcg
gtgatcacccgcttcgagggcctgcgcctggccgccgccgaggatctctacgaaaccgag
atccgcctcggccggggcgcggccctggtcgccgaactgaccgagctggtggatcggaac
ccggtgcgggagcggctcgccgacgcgctgatgcgcgcgctcgccgccgcgggccggggc
gcggaagcgctgaccgtctaccagcggacccgcgaagccctcgccgacgagctgggtgtt
gacccctcgccggaactgtccgcactgcatgtggcgctgctgcgcggcgaggtgggtgcg
cagcgtgaggaggaccgccgcaccaacctgcgcgccgagctgaccagcttcgtcggcaag
cgcgccgatatcgccgcggtgcgcgaactcgttgcggcccaccggctcacgacggtgacc
gggccgggcggctccggcaagacccggctggccaccgagaccggccgcgccctgctcgcc
gagctgccggacggggcgtggctggtggagctggccgccaccggttcgagcggcgacctc
gcgcagtccgcgctggccgcgctcggcctgcgggacgcgctgctcggcggcgcgcccaac
gcggaacccatcgaccggctcatcgcggccgtccgcgagcgcgacatgctgttgatcctc
gacaactgcgagcacgtgatcgagtccgcggccgccttcgctcaccgcatgctcggcgag
tgccggcggctgcgaatcctggccaccagccgggaaccgctgggcatcacgggcgaggcg
ctgtggcaggtggagccgctggccctgcccgccgggaacgcggatgccgcggagatcgaa
tcctccccggccgtccagctgctgcgcgaccgggcgagcgcggtgcgcaaggacctcgcc
tccgatgcccgctcactggcgaccatggcccgggtgtgccgggcgctggacgggatcccg
ctggccatcgaattggccgcggcgcggttgcgcaccatgtccctcgagcagctggccgac
cgcctcgacgaccggttccggctgctgaccggcggcagccgcaccgcgatcccgcagcac
cgcaccctgcgcgcggtggtcgactggagctgggagctgctcaccgacgccgagcgccgg
gtgttgcgccggctcgccgtgttctccggcggcgcgagtctggaagcggccgaacaggtt
tgcgcggccgccgagttcggtgcggacgccgcggtcgagcagtgggaggtgctcgaactg
ctgaccgcgctgaccgagaagtcgctgttgcgcaccgccggcgacgacgagccgcgctat
cgcatgctcgacaccatcaagcagtacgcccacgatcgcctggtggaggcgggggagtcc
gacgccgcgcgccgggcgcacctggcctacgtcaccggtctggccgcgaccgcggaaccg
catctgcgccgcgccgaacaggttcagtggctggcggtcctggacgccgagcacgacaac
atcgcggccgccatgcgtggcgcgctagccgccggtgacgcgcccggcgcgttggggctg
gccgcggcggccggttggtactggtggttgagcgggcacaaggccgagggcctggagctg
gtcagcgccgccgcggccctgcccgacgagacggtggacgccgagacccgggccaccgtg
tacgggctggtcgtgcacttcgtgacctccgggcccggtgatcagcatcaggtggaggag
tggatccacaaggcgagccgggtaagtcagggcatccgcaccagccatccggcgctggcc
ttcttgggcgcgctggagcggatgttgcaggggcccgaccagtttctgcccgccttcgaa
gcgttgctcgatgacgaggacccgtgggtgcgggccctggccaggctgcagaccggaaag
ttgcgggtcgtgctcggtcaggacggggaggcggcggacgagcagctggagctggcgctg
gccgagttccgggcgatcggtgagcgctgggggatgtcgttcgcgttgaccgagctggcc
gatcggatcgccatgcgcggtgaattcggccgggcgtgcgcgtatttcgaacaggcggtg
gcggcggccaccgaggtcggcgctgtcgaggacgccgtccggatgcgcgcccgccaggcc
cagttgtattggctgctgggtgatttcgatgccagtgcggtcgcgctggccgaggcgcag
cggtacgcggatcaggcggcctggccgagcggtctggccgaattggctttggtgaaagcg
gaattggcgcgctggaatggtgacggcgcggagaccaggcgccagatcgccgtcgccacc
gcgatgctgggtgaggaggccgggcagccgttcatcagcgcgttgatccacgatctgcgc
ggctatctggccgaggatccgggcgaggccagaaccgaacgcgccgcggccttcgcggcg
gcgaccgccggcgggcacgcgccgctgctggcccggatcatcgtgggcatcgcggatctg
gcgttgcgggacggtcaggacgagcaggcggtgcggctgctggcggccggtgacgcggtg
cgcggactggccgatcgctcgcatccggatgtggcccggatcgagcagacgacacgaagc
cgcctcggtgaagacggcttcaccgaggcggcgggggaggggacgcgggcggactggcac
gagctggcccaggtcacgctcgcttgctga
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