Nocardia tengchongensis: KHQ06_13375
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Entry
KHQ06_13375 CDS
T07484
Name
(GenBank) ATP-dependent helicase
Organism
ntc
Nocardia tengchongensis
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
UvrD-helicase
UvrD_C
AAA_19
AAA_28
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QVI24861
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Position
2914995..2918495
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AA seq
1166 aa
AA seq
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MRSDSSVQLVRRAEAETLPREWDPALRPLFDELGADPGWAPWQVLGGPGTGKTALLADLA
ATRILAGVPPESVLVLTYTKRAATDVRAAITARVAAAAPAAAYGASGYSAADRAAFDPAD
DGSVVDGVPGATRGPLVRTLHSYAFGLLRSFAAANGNPPPRLLTGSEQDIVIRELLRGDV
ADGALGWPERLHPALTAAGFAEQLRDLMLRATERGLGPEDLIELGRRHRHPEWVAAGYFA
ERYEQIMMLRWSVGMDVPEASAPALDAAELVTAALEAFHVDPELLAAERDRLRCILVDDA
QHLDPHAAQLIRLLGSGTATTVIAADPDQSVYTFRGADSRFAATPDAPADRRIILRRNHR
STRAVQEVADRIASRLPGSAIHRAQPSAPAGVDETHWDTAQLEGEVRVQVLTTPAKEAAL
IADHLRRAHLTHGVRWSRMAVIVRSVPLSLAPLRRALLAAGVPVRQPPADVPLARRRGAA
WMLLALRAVTAGDPTAVRHPRPIAFTADDALDLLAGPLGGADQISLRRLRRGIRRTVMEL
GYPEPSVAEADAVETAGALAVETNSAVAESFDGTDRFADLDRSSAEILRDLLVGTGNRVV
LEKLTTVEAAPLRRVLKALGRARKVRRESGGLEDVMWGVWTASTLERRWTGQSERGGAGG
MQADRDLDAVVGLFEAAAAYVDRLPRATIEGFVEYLEQQVIPQDNAPITDPGEAVTICSA
HAAAGREWDTVAVAAVQEGIWPDLRLRGTLLGVEELVDLLAGVGGAGEKVSRSAPLLAEE
RRLLLVACSRARRSLLVTAVESVTGDQDLVPSRFLGELDADAEDGRPGKIPPPVDPGRAL
AMHALIAELRTAACDPETNPARRMRAARQLARLAQAGVRGAHPDDWYGTAELSSVNPLWD
TESGMISLSPSTVDQLETCPLRWALERHGGGDGENPHALKGNLVHTLVQALAGQVNETQV
KQALVKAWKKVDPTARDGENWHSRAELRRTETMVDTFLAWLRNTRDELTAIGVEVPVDCV
LPARGPGELPVRITGRVDRVERDALGRFVIVDVKTGKTPISKQAAEEHAQLATYQVAAAE
GALGEGEPGGARLVYVAKPSAKEGATQRTQPPLDAAGVDSWRAIVHHAADASKGPSYLAM
RNDGCRHCKVAGSCPVQDRGRQVTDE
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgcgatcggatagctcggtgcaattggtgcgccgggccgaggcggaaacgctcccccgg
gagtgggaccccgccctccggccgctcttcgacgagctcggcgccgaccccggctgggcg
ccctggcaggtgctcggcggacccggtaccgggaagaccgcgctgctcgccgacctggcc
gccacccgcatcctggccggggttccgccggaatcggtgctggtgctcacctacaccaag
cgagcggccaccgacgtgcgcgccgccatcaccgcccgcgtcgccgccgcggctccggcg
gcggcctacggcgcatccggctattcggccgcggaccgggcggccttcgatccagccgat
gacggctcggtcgtggacggcgtgcccggcgcgacccgcggcccgctggtgcggaccctc
cactcctacgcgttcggcctgctgcgttcgttcgcggccgccaacggcaacccgccgccg
cgcctgctcaccggatccgagcaggacatcgtcattcgcgaattgctgcgcggcgacgtc
gccgacggcgcgctcggctggcccgaacggctgcatccggcactcaccgcggccgggttc
gccgaacaattgcgggacctcatgttgcgggccaccgaacgcggtctgggacccgaggat
ctgatcgagctcggccgccgccaccgccatcccgaatgggtcgccgccggctatttcgcc
gaacgctacgagcagatcatgatgctgcgctggtcggtcggcatggacgtgcccgaggcc
agcgcccccgccctcgacgccgccgaactcgtcaccgccgcgctcgaggccttccacgtc
gatccggaactccttgccgccgaacgtgatcgactgcgctgcatcctcgtcgacgacgcc
cagcacctcgatccccatgccgcccagctgatccgcctgctcggctccggcaccgccacc
accgtcatcgccgccgaccccgaccaatccgtctacaccttccgcggcgccgactcccgc
ttcgccgccacccccgacgcccccgccgaccgtcgaatcatccttcgccgcaaccaccgt
tccacccgcgctgtccaggaagtagccgaccgcatcgcctcccggctgcccggctccgcg
atccaccgcgcgcagccttccgcgcccgccggtgtcgacgagacccactgggatactgcg
caactcgagggtgaggtgcgggtgcaggtgctcaccacccccgccaaggaggcggcgctg
atcgccgaccacctgaggcgcgcccacctcacccacggcgtgcgctggtcccgcatggcg
gtgatcgtccggtcggtgccgctgtcactggccccgctgcgccgcgctctgctggccgcg
ggggttcccgtccggcagccacccgccgacgtgccgctcgcgcggcggcggggcgcggcg
tggatgctgttggcgctgcgggccgtaaccgccggtgatcctactgcggtgcggcatccg
cggccgatcgccttcaccgccgacgacgcgctcgacctgctcgcgggaccgctcggcggc
gcggaccagatcagcctgcggcgactgcgccgcggcatccggcgcaccgtcatggagctg
ggctacccggaaccttccgtcgctgaggccgacgcggtcgaaaccgccggagcccttgcc
gtggaaacgaattcggctgttgcggaatccttcgacggcaccgaccgtttcgccgacctc
gaccggtcgtcggcggagattctgcgggacctgctggtgggtaccgggaatcgagtggtg
ctcgagaagctcaccacggtggaggccgcgcctttgcggcgggtgctcaaggcgctgggg
cgggcccggaaggtgcggcgcgaaagcggtgggctcgaggacgtgatgtggggggtgtgg
acggcgtccacgctggagcggcggtggacgggccagtccgagcgcgggggcgcgggcggg
atgcaggccgatcgggacctggacgcggtggtcggtctgttcgaggcggccgcggcgtac
gtggatcggctgccacgggccactatcgagggcttcgtggaatacctggagcagcaggtg
attccgcaggacaacgcgccgatcaccgatcccggtgaagctgtgaccatctgcagtgcg
cacgcggcggccgggcgggaatgggacaccgtggcggtggcggcggtgcaggagggcatc
tggccggacctgcggttgcggggcacgctcctgggtgtcgaggaactggtggatctgctc
gccggcgtcggtggtgcgggcgagaaggtgagccgttccgcgccgctgctggccgaggaa
cggcgactgctgctggtggcgtgtagcagggcgcggcgatcgctgctggtgacggcggtc
gaatccgtcacgggggatcaggatctggtgccctcgcgcttcctgggcgaactggacgcg
gatgcagaggacggccggccgggcaagatcccaccgccggtggaccccggccgcgccctg
gccatgcacgcgctgatcgccgaattgcgcaccgccgcctgcgatcccgagaccaatccg
gcccgccggatgcgcgcggcccggcagctggcgcggctggcgcaggccggggtgcgcggc
gcccaccccgacgactggtacggcaccgccgaactctcctccgtgaatccgctgtgggac
accgaatccgggatgatctcgctgtccccgtccaccgtcgaccagctcgagacctgcccg
ctgcgctgggcgctggaacggcacggcggcggcgacggcgagaacccgcacgccctcaag
ggcaatctcgtgcacaccctggtgcaggcgctggccgggcaggtcaacgaaacccaggtc
aagcaggccctggtgaaggcgtggaagaaggtcgaccccaccgcccgcgacggcgagaac
tggcattcccgggccgaactgcgccgcaccgagaccatggtcgacaccttcctggcctgg
ctgcgcaacacccgcgacgagctcaccgccatcggcgtcgaggtgccggtggactgcgtg
ctgcccgcacgcggccccggcgaactgccggtccggatcaccggccgggtggaccgggtg
gaacgagatgccttgggccgcttcgtcatcgtggacgtgaagaccggcaagacgcccatc
tccaagcaggccgccgaggagcacgcgcagctggccacctaccaggtcgcggccgccgag
ggcgcgctcggcgagggcgagcccggcggcgcgcgcctggtgtacgtcgccaaacccagt
gccaaggaaggcgccacccagcgcacccagccgccgctggacgccgcgggcgtcgacagc
tggcgcgccatcgtccaccacgccgccgacgcctccaagggccccagctacctcgccatg
cgcaatgacggttgccgccactgcaaggtcgcgggcagctgccccgtgcaggaccgcggc
cgccaggtgacggacgagtga
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