Nocardia tengchongensis: KHQ06_13385
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Entry
KHQ06_13385 CDS
T07484
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ntc
Nocardia tengchongensis
Pathway
ntc03420
Nucleotide excision repair
ntc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ntc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KHQ06_13385
03430 Mismatch repair
KHQ06_13385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ntc03400
]
KHQ06_13385
Enzymes [BR:
ntc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KHQ06_13385
DNA repair and recombination proteins [BR:
ntc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KHQ06_13385
MMR (mismatch excision repair)
Other MMR factors
KHQ06_13385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD_C_2
UvrD-helicase
HD_4
NYN
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QVI24862
LinkDB
All DBs
Position
2919458..2921821
Genome browser
AA seq
787 aa
AA seq
DB search
MESAAPHRNTAANYDDAADVPRPGDGQAARPIAGADDPRVQGTSGDSAGAQAHRHRLAVT
AVGDPMQSIYGWRGASAANLPRFTTDFPSAPGVPAPVLPLLTSWRNPPEALDLANLVSDP
LRERAARGGGVTVDALRPRPDATAGLVALALAETVAEERDWVAGRIAAEWAEAREAENPP
PTSAVLVRRNADAAPLAEALRERGLPVEIVGLGGLLHTPEVADIVATLRLIADPAAGSAA
VRILTGARWRIGVSDIAALSRRARELSIRRPAGQTDAITDTATLDEALREVAPEPAEKAG
LGDAIADPGDAEQYSAQGFARIVALGRELSALRERSGQPLAELVADVERTIGVGVETQAR
RTHAAAGREHLDAFAEVVAGYTADHRSSLTGLLDFLAAAEEVENGLEPGEVEVAHDRVQV
LTVHAAKGLEWEVVAVPHVVDGTFPSGTGTATWMGALAELPTTLRGDRAQEDATDGVPVL
DLTDLYDRADLERALDDHKKALAARRLDEERRLFYVALTRTERALFVSAHHWAETGSKPK
GPSGFLLELKHETETPGSALSGGVDIDRWDDPPLPGTPNPFTDNPQTATWPRDPLGSRRE
FVEEGAALVKAALEVLREESKPEQIELDFGPGFGDAATDPESAEDDPADDDPDGEDPEGW
AEDVDALIAEHRAAEQAVREVELPGQLAATALVDLRADPAKLAARLRRPLPYPPSPYTRR
GTAFHAWLQRWFAGARLLGFETLPGAADVADTDADLMRLQEAFLASRGPTAMPWTWRSPS
KPPSRAP
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtgcagcgccgcacaggaatacggctgcgaactacgacgacgccgcggacgtc
ccacgaccaggcgacgggcaagcggcgcggcctatcgccggtgcggacgatccccgtgtc
caaggcacctccggtgactcggccggcgcacaggcgcaccgacaccggctggcggtcacg
gcggtcggcgatccgatgcagtcgatctacggctggcgtggggcgtcggcggccaacctg
ccgcgcttcaccaccgacttccccagtgcgccaggggttcccgcgcccgtgctgccgctg
ctcaccagctggcgcaatccgcccgaggcccttgacctggccaacctggtgtcggatccg
ctgcgggagcgcgcggcgcggggcgggggagtgacggtggacgcgctgcggccccgtccc
gacgccaccgccgggctggtcgcgctggcgctggcggaaaccgttgcggaggaacgggac
tgggtggccgggcggatcgccgcggaatgggccgaggcgcgggaggcggagaacccgcca
cccacctccgcggtcctggtgcggcgcaatgccgatgccgcaccgctcgccgaagccctg
cgcgaacgcggactgccggtggagattgtgggcctgggcgggctgctgcacacgcccgag
gtcgccgacatcgtcgccaccctgcgcctgatcgccgatcccgcggccggcagtgcggcg
gtacgcatcctgaccggcgcgcgctggcgcatcggcgtctccgatatcgcggctctgtcc
cggcgcgcccgcgagctgtccatccgccgccccgccgggcagaccgacgccatcaccgac
accgcaaccctcgacgaggcgctgcgcgaggtcgcgcccgaacccgccgagaaggcgggc
ctcggcgacgccatcgccgatcccggtgacgcggaacagtattcggcgcagggcttcgcc
cgcatcgtggcgctgggccgggagctgtcggcgctgcgcgagcggtccgggcagccgctg
gccgaactggtcgccgacgtcgaacgcaccatcggcgtcggcgtcgagacccaggcccgc
cgcacccacgccgccgccggccgcgaacacctcgacgccttcgccgaagtggtcgccgga
tacaccgccgaccaccgctcctcgctgaccggcctgctcgacttcctcgccgccgccgag
gaggtcgagaacggcttggagcccggcgaagtggaggtcgcgcacgaccgggtgcaggtg
ctcaccgtgcacgccgccaagggcctggaatgggaggtggtcgcggtcccgcacgtggtg
gacggcaccttcccctccggcaccggcaccgccacctggatgggcgcgctcgccgaactg
cccaccacgctgcgcggcgaccgcgcccaggaggacgccaccgacggcgtccccgtcctc
gacctgaccgacctctacgaccgcgcagacctggaacgcgccctcgacgaccacaagaag
gccctcgccgcccgccgcctcgacgaggaacgccgcctgttctacgtggccctcacccgc
accgagcgcgccctgttcgtctccgcccaccactgggccgagaccggctcgaaacccaag
gggccctccgggttcctgctcgaactgaagcacgagaccgagacgcccggctcggcgctg
tccggcggcgtcgacatcgaccgctgggacgacccgcccctgcccggcacccccaacccc
ttcaccgacaacccgcagaccgcgacctggccgcgcgacccgctcggctcccgccgcgaa
ttcgtggaagaaggcgcggccctggtcaaggcggcgctggaggtgctgcgcgaggaatcg
aagcccgagcagatcgagctcgacttcggccccggattcggcgacgcggcaaccgatccc
gaatccgccgaggacgatcccgcggacgacgaccccgacggcgaggaccccgagggctgg
gccgaggacgtcgatgccctgatcgccgagcatcgcgccgccgaacaagccgtccgcgag
gtggaactgcccggccagctcgccgccaccgccctggtcgacctgcgcgccgaccccgcg
aaactggctgcgcgcctgcgccgtccgctcccgtacccgcccagcccctacacccgccgc
ggcaccgccttccacgcctggctgcaacgctggttcgccggcgcgcgcctgctcggcttc
gaaacgctgcccggcgcggccgatgtcgccgacaccgacgccgacctgatgcgcctccag
gaagccttcctcgcctcccgtgggccgaccgcaatgccgtggacgtggaggtctccttcg
aaaccaccatcgcgggcaccgtga
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