KEGG   Nocardia tengchongensis: KHQ06_18435
Entry
KHQ06_18435       CDS       T07484                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
ntc  Nocardia tengchongensis
Pathway
ntc03030  DNA replication
ntc03410  Base excision repair
ntc03420  Nucleotide excision repair
ntc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ntc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    KHQ06_18435 (polA)
   03410 Base excision repair
    KHQ06_18435 (polA)
   03420 Nucleotide excision repair
    KHQ06_18435 (polA)
   03440 Homologous recombination
    KHQ06_18435 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ntc03032]
    KHQ06_18435 (polA)
   03400 DNA repair and recombination proteins [BR:ntc03400]
    KHQ06_18435 (polA)
Enzymes [BR:ntc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     KHQ06_18435 (polA)
DNA replication proteins [BR:ntc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     KHQ06_18435 (polA)
DNA repair and recombination proteins [BR:ntc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     KHQ06_18435 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     KHQ06_18435 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_polI_exo1 DNA_pol_A_exo1 HHH_5 DNA_pol_lambd_f
Other DBs
NCBI-ProteinID: QVI24518
UniProt: A0ABX8CZ37
LinkDB
Position
3953665..3956430
AA seq 921 aa
MSGVIPRLSRVTPASTDQRPAVAPTSVSGEQPTLLLLDGHSLAYRAFYALPAENFKTQSG
QTTNAVYGFTAMLINLLRDEKPSHVAAAFDVSRKTFRTEAFPEYKANRATTPDEFKGQVE
TTQEVLGALGIPVMAIEGYEADDLIATLTVQAVDQGFRVLIVTGDRDSLQLVNDSVTVLY
PKKGVSELTRFTPAAVEEKYGLTPAQYPDFAALRGDPSDNLPGIPGVGEKTATKWIREYG
DLATLVDQVDKVKGKVGDALRANLSSVVLNRQLTEMVKTVPLPYAPDQLAVQPWDRDQIH
RLFDELEFRVLRDRLFDTLAPVEPEAESGFEISGSALSAGTVAAWLAEHAGTGVRHGVSV
VGNGSPVQGDTQAVALAAADGEGAYIDVHTLTPEDEKALGEWLADPEIPKALHEAKNAMH
ALRGRGWQLGGLSSDTALAAYLILPGQRTFNLEDLSLRYLSRELRVDNGGETQLSLLDDE
DEVDAEAANAQMLRARAVFDLADAFDAELERIESTALLHDMELPLLGVLADLEAAGIAVD
SDQLEQLQREFAERVAEAADNAYGVIGKQINLGSPKQLQVVLFDELDMPKTKRTKTGYTT
DADALESLYEKTQHPFLQHLLEHRDATRLKVTVDGLLKSVADDGRIHTTFNQTVAATGRL
SSTEPNLQNIPIRTDMGRRIRDTFVVGPGFESLMTADYSQIEMRIMAHLSKDEGLIEAFN
SGEDLHNFVASKAFDIPISEVDPELRRRIKAMSYGLAYGLSAYGLSQQLKISADEAKVQM
DIYFNRFGAIRDYLHDAVDQARKVGYTETLFGRRRYLPDLDSSNRQRREAAERMALNAPI
QGTAADIIKVAMIDTQKAIRAAGLKSRMLLQIHDELVFEVAAGEREQLESLAREHMSNAI
ELSVPLEVSVGVGRSWDSAAH
NT seq 2766 nt   +upstreamnt  +downstreamnt
atgtcgggggtgatacctagactctctcgggtgacccctgcctctactgatcagcgtcct
gctgtcgcgcctacgtccgtgtccggggaacagccgaccctgctgttgctggatgggcat
tcgctggcctatcgcgcgttctacgcgctgccggcggagaacttcaagacgcagagcggg
cagaccaccaatgccgtgtacgggttcacggcgatgctgatcaatctgctgcgggacgag
aagccttcgcatgtggcggcggcgttcgacgtgagccgcaagaccttccggaccgaggcg
ttcccggagtacaaggcgaatcgggcgaccacgcccgacgagttcaaggggcaggtggag
accacccaggaagtgctgggggcgctgggtattccggtgatggccatcgaggggtacgag
gcggacgatctgatcgccacgctcaccgttcaggccgtcgaccagggcttccgggtcctc
atcgtgaccggcgaccgggactcgctgcagctggtcaacgacagcgtcaccgtgctgtac
ccgaagaagggcgtctccgagctgacccggttcaccccggcggccgtcgaggagaagtac
gggctcaccccggcgcagtatccggacttcgcggcgctgcgcggcgacccgagcgacaat
ctgccgggcattccgggcgtgggggagaagaccgccaccaagtggatccgcgagtacggg
gacctggccaccctggtcgaccaggtggacaaggtgaagggcaaggtcggagacgcgttg
cgcgccaacctgtccagtgtcgtgctcaatcggcagctcaccgagatggtgaagaccgtg
ccgctgccctacgcgcccgaccagctggccgtgcagccgtgggatcgggaccagatccac
cgcctgttcgacgagctcgagttccgggtcctgcgcgaccggctcttcgacaccctggcc
ccggtggagcccgaggccgaatccggtttcgagatcagcggcagcgcgctgtccgcgggc
accgtcgccgcgtggctcgccgagcacgccggaaccggtgtgcggcacggggtctcggtg
gtcggcaacggatcgccggtgcagggcgacacccaggccgtcgcgctggccgccgccgac
ggcgagggcgcctacatcgacgtccacaccctgacccccgaggacgagaaggcgctcggg
gaatggctcgccgacccggagatcccgaaggcgttgcacgaggccaagaacgccatgcac
gccctgcgcgggcgcggctggcagctgggcgggctcagcagcgacaccgcgctggccgcc
taccttatcctgccgggccagcgcaccttcaacctcgaagacctgtccctgcgctacctg
agccgggaactgcgcgtggacaacggcggcgagacccagctgtcgctgctcgacgacgag
gacgaagtcgacgccgaggccgccaacgcccagatgctgcgtgcccgcgcggttttcgac
ctcgccgacgccttcgacgccgagctcgagcgcatcgagtcgaccgcgctgctgcacgac
atggaactgccgctgctgggcgtgctggccgacctggaggccgcgggcatcgccgtcgac
tccgatcagctcgagcagctgcagcgcgagttcgccgagcgcgtcgccgaggccgccgac
aacgcctacggcgtcatcggcaagcagatcaacctgggctcgcccaagcagctgcaggtg
gtgctgttcgacgagctcgacatgccgaagaccaagcgcaccaagaccggctacaccacc
gacgccgacgcgctcgagagcctctacgagaagacccagcaccccttcctgcagcacctg
ctcgagcaccgcgacgccacccgcctcaaggtgaccgtggacggcctgctcaagtcggtc
gccgacgacggccgcatccacaccaccttcaaccagacggtggcggccaccggccggctg
tcctcgaccgagccgaacctgcagaacatcccgatccgcaccgacatgggccgccgcatc
cgcgacaccttcgtcgtcggcccgggcttcgagtcgctgatgaccgcggactacagccag
atcgaaatgcggatcatggcccacctgtccaaggacgagggcctgatcgaggccttcaac
tccggcgaggacctgcacaacttcgtcgcctccaaggccttcgacatcccgatctccgag
gtggatccggagctgcgccgccgcatcaaggccatgtcctacggcctggcctacggactg
tccgcctacggcctgtcacagcagttgaagatcagcgccgacgaggccaaggtccagatg
gacatctacttcaaccgtttcggcgccatccgcgactacctgcacgacgccgtcgatcag
gcccgcaaggtcggctacaccgagaccctcttcggccgccgccgctatctgccggatctg
gattccagcaaccggcagcgccgcgaggccgccgagcggatggcgctcaacgccccgatc
cagggcacggccgccgacatcatcaaggtcgccatgatcgatacccagaaggccatccgt
gcggccggtctgaaatcccgcatgctgctgcagatccacgacgaactcgtcttcgaggtc
gcggcgggggagcgggagcagctggaatcgcttgcgcgcgagcacatgtccaatgccatc
gagctgtcggtgcccctcgaggtgtcggtgggtgtgggccgcagctgggattcggccgcg
cactag

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