Nocardia tengchongensis: KHQ06_26135
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Entry
KHQ06_26135 CDS
T07484
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
ntc
Nocardia tengchongensis
Brite
KEGG Orthology (KO) [BR:
ntc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ntc03021
]
KHQ06_26135
Transcription machinery [BR:
ntc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KHQ06_26135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
KORA
MarR
Trp_repressor
HTH_23
GntR
HTH_3
HTH_10
MarR_2
HTH_28
HTH_IclR
HTH_Crp_2
Sigma70_ECF
GlnE
Phage_antitermQ
HTH_Tnp_4
CENP-B_N
Motif
Other DBs
NCBI-ProteinID:
QVI19792
UniProt:
A0ABX8CII4
LinkDB
All DBs
Position
complement(5530941..5531795)
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AA seq
284 aa
AA seq
DB search
MSTTTDRSTRTKRKSAPADSYDNIEPRFSELAAMADGDSGRPILRNEILQLCMPLADHIA
RRFAGRGQELDDLQQVARLGLIQAVDRFDVSRGSTFLAFAVPTIMGEVRRHFRDHAWAVR
VPRGLKEIHGQLGPATDTLAQRLGRLPTAGEIATELAVEPNVVTQALVARNAFRADSLDR
LTQPEEQSTPSSVLDSLGADEPCYQLTEDAMTVRPLIAQLPERERTILILRYFESQTQAE
IAHRMGVSQMQISRILSRTLQRLHDQALGPSLERADSCEASIGG
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgaccacagatcgatcgacccggacgaaacgtaaatcggcaccagccgacagt
tacgacaacatcgaacctcggttcagcgaactcgccgcaatggcggacggcgattcgggc
aggcccatactgcggaacgagattctgcagctgtgcatgccattggctgaccatattgcc
cgccgcttcgcaggccgcggccaggaactcgacgacctgcaacaggtcgcacggctcgga
ttgatccaggccgtagaccgtttcgacgtgagccgcggcagtaccttcctggctttcgcg
gtgccgaccatcatgggcgaggtgcgtaggcacttccgcgaccatgcatgggctgttcga
gttccccgcggtctcaaggagattcacgggcaactcggtcccgccaccgacacgttggcc
cagcgactcggccgcctgccgaccgcgggggagatcgccacggaactcgctgtggagccg
aacgtggtcactcaggcgctggtcgcgcgcaacgcctttcgcgccgattcgcttgatcgt
ctcacccagccggaggaacagagcacgccgtcctcggtgctcgacagtctgggggcagac
gaaccctgctaccagctcaccgaagacgccatgaccgtgcggccgttgatcgctcagctt
cccgagagggaacgcacaatcctgattctgcggtacttcgaatcgcagacgcaggctgag
attgcccaccgcatgggtgtctcgcagatgcagatatcgcgaatcctctccagaactctc
cagcggctacacgaccaagcgctcggaccgagcctcgaacgagccgattcctgcgaagca
tcgatcggcggttga
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