Nocardia tengchongensis: KHQ06_28460
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Entry
KHQ06_28460 CDS
T07484
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
ntc
Nocardia tengchongensis
Brite
KEGG Orthology (KO) [BR:
ntc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ntc03021
]
KHQ06_28460
Transcription machinery [BR:
ntc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KHQ06_28460
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
MarR_2
KORA
GerE
HTH_3
HTH_Crp_2
MarR
HTH_Tnp_ISL3
DUF7343
HTH_10
Sigma70_ECF
HTH_24
DUF134
Motif
Other DBs
NCBI-ProteinID:
QVI25181
LinkDB
All DBs
Position
6010079..6010969
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AA seq
296 aa
AA seq
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MPTPDADGPEDPAANTENTGVDETEEPAEAEETVDAEEAEEVARTVSGYDDVALLFEELA
ATVPGSARRAALRSQLINRCIPLADHIARKFSGRGEPFDDLTQVARVGLVHAVDRFDITR
GSNFLSFAVPTIMGEVRRYFRDNTWAMRVPRRVKETHLRIGSAIDALSQQLGRSPTAKEI
AAALDIDADEVTQAVIAGNAYQPSSIDAVSVGRDTEASLLDTLGEEESQFDRVEEYVAIR
PLLAGLPERERRILTMRFFESMTQTQIAQQMGISQMHVSRILSKTLARLREQSARE
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atccccacacccgacgcggacggccccgaagatccggccgcgaacaccgagaacaccgga
gtcgacgagaccgaagagcccgccgaggccgaggagaccgtcgacgccgaggaagccgaa
gaggtcgcgcgcaccgtctccggatacgacgacgtcgcgctgctgttcgaggaactggcc
gccacggtgcccggatccgcgcgccgcgcggcgctgcgctcgcagctgatcaaccgctgc
attccgctggccgaccacatcgcccgcaaattcagcggtcgcggtgaacctttcgacgac
ctcacccaggtcgcgcgggtcggcctggtgcacgcggtggaccgcttcgacatcacccgc
ggctccaacttcctgtccttcgcggtgcccaccatcatgggcgaggtccgccgctacttc
cgcgacaacacctgggccatgcgggttccccggcgcgtcaaggaaacccacctgcgcatc
ggctccgccatcgacgcgctctcccagcagctggggcgctcccccaccgccaaggagatc
gccgccgccctcgacatcgacgccgacgaggtcacccaggcggtcatcgccggaaacgcc
taccagcccagcagcatcgacgcggtctccgtcggccgcgacaccgaggcctccctgctc
gacaccctcggcgaggaagaatcccagttcgaccgcgtcgaggagtacgtcgcgatccgc
cccctgctggccggcctccccgaacgcgaacgccgcatcctcaccatgcgcttcttcgaa
tccatgacccaaacccagatcgcccagcagatgggcatctcccagatgcacgtctcccgc
atcctgtccaagaccctcgcccgcctccgggagcagtcggcgcgggaatga
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