Nocardia tengchongensis: KHQ06_28525
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Entry
KHQ06_28525 CDS
T07484
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ntc
Nocardia tengchongensis
Pathway
ntc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ntc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KHQ06_28525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ntc03400
]
KHQ06_28525
Enzymes [BR:
ntc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KHQ06_28525
DNA repair and recombination proteins [BR:
ntc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KHQ06_28525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
Motif
Other DBs
NCBI-ProteinID:
QVI25182
LinkDB
All DBs
Position
complement(6022927..6025377)
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AA seq
816 aa
AA seq
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MARVLPLLEPAHLDRDFDYVVPPELDELAQPGVRVRVRFSGRLIDGYLLERLERSDHTGK
LVRLERVVSGERVLTPEILKLVTAVAARYAGTRADVLRLAIPPRHAKVETEGTEKPEKPK
RTSKKNATADSVVAVDGVVDLDAEQFSVAEQPGNAPAASAVAAPGSADIAAAQADLDGVE
PATESGLGLTESGSATEGATFDHNAVPVPVEPADAVAVGNTTEIGSTAGPARDGGEFIGG
AAADGAGVEPVTPPEGEPGPQELSAAPSQSLAAEFPGWGRYVHGHSFLGALAAGRGPRAG
WQALPGEDWARRLAELAAVTVRGGRGAVIMVPDQRDLDRVLAECVALLGESAVGLAAGLG
PSARYRRWLSVLRGQAKVVVGTRSAVFSPVRDLGLIAMWDDGDDTFAEPRSPYPHAREVA
MLRAHETGAAFVAAGFARTAEVQAIVESGWAHDLLADRSVLRQAMPRIAAPGDTDAALER
DPIAQAIRIPAVAFMEARKALKDGGAVLVQVPRRGYIPALSCAKCRIPARCRHCNGPLAL
PDSAPASRGALRSGREGVAEAQSPACRWCGITEAAFRCGACGSRALRAVVIGASRTAEEL
GRAFPGVPVRGSGGSTILNTVPAGAQVVVSTIGAEPPVPGGYAVAMLLDGWALLGRADLR
AAEDALRRWMSAAALVRPGGRVIVMADAALPTVQALVRWDPVWHARFELEQRTEVRFPPA
VRFAAIDGTSDSIAELLGEAKLPGNVEVLGPVPLPPGARKPFSSGDSPAEVERMILRADR
SGAAALSRALTAAQAVRSTHRSDAPLRVQIDPIDIG
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atcgcgcgggtcctgcccctgctcgaacccgcccacctggaccgcgatttcgactatgtg
gtgccccccgagctcgacgaactcgcccaacccggcgtccgggtccgagtccgcttctcc
ggccgcctcatcgacggctacctcctcgaacgcctcgaaagatccgaccacaccggcaaa
ctcgtccgcctcgaacgcgtcgtctccggcgaacgagtcctcacccccgaaatcctgaaa
ctcgtcaccgccgtagccgcccgctacgccggcacccgcgccgacgtcctccgcctcgcc
atcccaccccgccacgccaaggtcgaaaccgaaggcacagaaaagcccgaaaagcccaag
cgcacttcgaagaagaacgccaccgccgattcggtcgtggccgtggacggcgtggtcgac
ctcgatgctgagcaattctcggtcgcagagcagccgggcaatgcgcccgccgcctcggcc
gtcgcggcaccggggagtgcggacatcgctgccgcacaggcagatttggatggcgtcgag
cccgcgacggagtctgggctcggcctcaccgagagcggtagtgccactgagggcgctacg
ttcgaccacaacgcggtccccgtgccggtcgagcccgccgatgccgtggctgtggggaac
actacggagatcggctcgaccgcaggtccagcccgtgatggcggagaattcatcggaggc
gcggcggccgacggcgcaggcgtggagcccgtgacgccgcccgaaggtgagccgggaccg
caagaactgagtgctgcaccgtcgcagtcattggccgccgagttccccggttggggccgc
tatgtgcacggccattcgttcctgggtgcgctggcggcggggcgcgggccgcgggcgggg
tggcaggcgttgccgggggaggattgggcgcggcgcctggcggagttggcggcggtgacc
gtgaggggtgggcgcggggcggtgatcatggtgccggatcagcgggatctggatcgggtg
ctggcggaatgtgtcgcgctgctgggggagtcggcggtggggttggcggccgggttgggg
ccctcggcgcggtatcggcgatggctgtcggtgttgcgggggcaggcgaaggtggtggtg
gggacgcgcagcgcggtgttctcgccggtgcgggatctcgggttgatcgcgatgtgggac
gacggggacgatacgttcgccgagccgcggtcgccgtatccgcatgcgcgggaagtggcc
atgttgcgcgcgcacgagaccggggcggcgttcgtcgcggccgggtttgcgcgcactgcc
gaggtgcaggcgatcgtcgaatccgggtgggcgcatgacctgctcgcggatcggtcggtg
ctgcggcaggccatgccgcgtatcgccgcgcccggggacaccgacgcggcgctggaacgt
gatcccatcgcgcaggcgatccgcatcccggcggtggcgttcatggaggcgcgcaaagcg
ctcaaagacggtggggcggtactggttcaggtgccgcgacgcggatacattccggcgttg
tcctgcgccaaatgccggatcccggcccgctgccgccactgcaatggaccgctggcgttg
cccgacagcgcgcccgcgtcacgtggcgcattgcgcagtgggcgtgagggtgtcgccgag
gcccagagcccggcctgccgctggtgcggaatcaccgaggcggcgttccgctgcggcgcg
tgcgggtcccgagcgttgcgggccgtcgtcatcggcgcgtcacgtacggcggaagagttg
gggcgggcgtttcccggtgtccccgttcgaggttcgggcggttccaccatcctgaacacc
gtgccggcgggtgcgcaggtggtggtctccaccatcggcgccgaacccccggtgcccggc
ggctacgccgtcgccatgcttctcgacggctgggctctgctcggccgcgccgacctgcgc
gccgccgaggacgccctgcgccgctggatgtcggccgccgccctggtccgccccggcggc
cgcgtcatcgtcatggccgacgccgcgctgcccaccgtgcaggccctggtgcgctgggat
ccggtgtggcacgcccgtttcgagctcgagcaacgcaccgaggtccgtttcccgcccgcg
gttcgcttcgccgccatcgacggcacgtccgactcgatcgccgaattgctcggcgaggca
aagcttcccggcaacgtggaagtcctgggcccggtcccgctgccgcccggtgcgcgaaag
cccttctcctccggcgactctcccgccgaggtcgaacgcatgatcctgcgcgccgaccgc
tccggcgccgccgccctctcccgagccctcaccgccgcccaggcagtccgcagcacccac
cgctccgacgcccctctgcgcgtccagatcgaccccatcgacatcggctag
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