Nocardia tengchongensis: KHQ06_29165
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Entry
KHQ06_29165 CDS
T07484
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ntc
Nocardia tengchongensis
Pathway
ntc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ntc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KHQ06_29165 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ntc03400
]
KHQ06_29165 (ruvB)
Enzymes [BR:
ntc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KHQ06_29165 (ruvB)
DNA repair and recombination proteins [BR:
ntc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KHQ06_29165 (ruvB)
RecFOR pathway proteins
KHQ06_29165 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
TIP49
AAA_5
AAA_16
Mg_chelatase
nSTAND3
AAA_14
Sigma54_activ_2
AAA_3
RNA_helicase
HTH_AsnC-type
Resolvase
IstB_IS21
Zeta_toxin
AAA_33
DUF815
Rad17
Motif
Other DBs
NCBI-ProteinID:
QVI20246
LinkDB
All DBs
Position
complement(6163802..6164905)
Genome browser
AA seq
367 aa
AA seq
DB search
MSEDFDDFDEAGFDDAESSVTASYLQSDGEIEASLRPKSLDDFIGQPRVREQLALVLRGA
KMRGGTPDHVLLSGPPGLGKTSMAMIIAGELGTALRLTSGPALERAGDLAAMLSNLVEGD
VLFIDEIHRMARPAEEMLYLAMEDFRVDVVVGKGPGATSIPLDIAPFTLVGATTRSGALT
GPLRDRFGFTGHMDFYEPLELQQILERSARILGVRLESDAAAEIAGRSRGTPRIANRLLR
RVRDYAEVKADGLVTVEIAHAALAVYDVDVLGLDRLDRAVLSALIRSFNGGPVGVSTLAV
AVGEEATTVEEVCEPFLVRAGLVARTPRGRVATSAAWEHLGLVPPPDLVFGSIEVRPREP
QMDLFES
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggatttcgacgacttcgacgaggccgggttcgacgatgccgaatccagcgtc
accgcaagctatctgcagtccgacggcgagatcgaggccagcctgcgcccgaagtcgctc
gacgacttcatcggccagccacgcgtgcgggaacagctggccctggtgctgcgcggcgcg
aagatgcgcggcggcacccccgaccacgtgttgctgtcgggcccaccgggtctgggcaag
acgtcgatggccatgatcatcgccggtgaactgggcaccgccctgcgcctcacctccggc
cccgccctggaacgcgccggcgacctggccgccatgctcagcaacctggtcgagggcgac
gtcctgttcatcgacgagatccaccgcatggcccggcccgccgaggaaatgctgtacctg
gcgatggaggacttccgcgtcgacgtggtcgtcggcaaaggccccggcgcgacctcgatt
cccctcgacatcgcgccgttcaccttggtgggcgcgacgactcgttccggcgcgctgacc
ggtccgctgcgtgaccgcttcggattcaccgggcacatggacttctacgagcccctcgaa
ttgcagcagatcctggaacgctcggcccggatcctgggcgtgcgtttggaatccgacgcc
gccgccgagatcgccggacgttcccggggcacgccgcgtatcgccaaccggctgttgcgc
cgcgtgcgcgactacgcggaggtcaaggccgacggcctggtcacggtcgagatcgcgcat
gccgcactggccgtctacgacgtcgatgtgctcggcctggaccgcctcgaccgcgcggtg
ctgagcgccctgatccgcagcttcaacggcggcccggtcggtgtgtccaccctcgccgtc
gcagtcggtgaggaagcgaccaccgtcgaggaggtctgcgaacccttcctggtgcgagcg
ggtttggtggcccgcaccccccgcggtcgtgtcgccacgtccgcggcctgggagcatctg
ggcctggtgccgccgccggacctggttttcggttcgatcgaggtgcggccccgcgaaccg
caaatggacctgttcgagtcgtaa
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