Nocardia tengchongensis: KHQ06_30400
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Entry
KHQ06_30400 CDS
T07484
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ntc
Nocardia tengchongensis
Brite
KEGG Orthology (KO) [BR:
ntc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ntc03016
]
KHQ06_30400
Enzymes [BR:
ntc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
KHQ06_30400
Transfer RNA biogenesis [BR:
ntc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
KHQ06_30400
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QVI20439
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All DBs
Position
6406067..6407311
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AA seq
414 aa
AA seq
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MSVPDEPEATAAVPLLAPVDGVPPVLDSASDVAAAARRLAAGTGPLAVDAERASGFRYSN
RAYLIQLRREGAGSFLIDPIPVDGDLAPLADAINGLEWVLHSADQDLPGLAELGLYPAEL
FDTELGGRLAGYERVGLAAMVEKLLGRELKKGHGAADWSTRPLPDDWLNYAALDVELLLE
LRAAVAADLSDQGKSEWAAQEFEHVRTAEPSGPKADRWRRTSGIHTLRRTRQLATVRELW
TTRDRLARLRDVAPARILPDSAIVAAATSEPKSIAALRALPIFGGPRQRRYSREWLGAVE
RARALPDNELPPLTQPFDGPPPVNRWERRDPAAAARLQRARAAMSELSTEVSVPVENLLT
PDLLRRMCWDGLPKSVTNGEAPALIEDYLAAGGARPWQRELTVPRLSEALYPKA
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtaccagatgaacccgaagccactgccgcggtaccgttgctcgcgccagtggac
ggtgtaccgccggtactggactctgcctccgatgtggccgcggccgcccgccgcctcgcc
gccggcaccggcccgctcgcggtcgacgccgagcgcgcctccggcttccgctactccaat
cgcgcctacctgatccagctgcgccgggagggcgcgggcagcttcctcatcgacccgatt
ccggtcgacggcgacctggccccgctcgcggacgccatcaacggcctggagtgggtgctg
cactccgccgaccaggatctgcccgggctggccgagctggggctgtacccggccgagctg
ttcgacaccgagctgggcgggcgcctggccggatacgagcgggtcgggctggccgccatg
gtggagaagctgctgggccgcgaactgaagaagggccacggcgcggccgactggtccacc
cgccccctgcccgacgactggctgaactacgccgccctcgatgtcgagttactcctcgaa
ctgcgcgccgccgtcgccgccgacctgtccgaccagggcaaatccgagtgggccgcacag
gaattcgagcacgtccgcaccgccgagccgtccggccccaaggccgaccgctggcgccgc
acctccggcatccacaccctgcgccgcacccgccagctcgccaccgtccgcgaactatgg
accacccgcgaccgcctcgcccggctgcgcgacgtggcaccggcccgcatcctcccggat
tcggccatcgtggccgccgcgaccagcgagcccaagtccatcgccgccctgcgcgccctg
ccgatcttcggcgggccccgccagcgccgctactcgcgcgaatggctcggcgcggtcgaa
cgcgcccgcgccctgcccgacaacgagctgcccccgctcacccagcccttcgacggcccg
cccccggtcaatcgctgggaacgccgcgacccggccgccgccgcccgcctgcaacgcgcc
cgcgcggccatgagcgagctgtcgaccgaggtgtcggtcccggtcgagaacctcctcacc
cccgacctgctgcgccgcatgtgctgggacgggctgcccaagtcggtcaccaacggcgag
gccccggccctcatcgaggactatctggccgcgggcggcgcccggccctggcagcgcgag
ctgacggtgccccgcctgagcgaagccctctacccgaaggcctga
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