Nocardia tengchongensis: KHQ06_30565
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Entry
KHQ06_30565 CDS
T07484
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
ntc
Nocardia tengchongensis
Brite
KEGG Orthology (KO) [BR:
ntc00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KHQ06_30565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ntc03021
]
KHQ06_30565
Transcription machinery [BR:
ntc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KHQ06_30565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HC2
HTH_20
Motif
Other DBs
NCBI-ProteinID:
QVI20464
UniProt:
A0ABX8CKG8
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All DBs
Position
6435847..6437277
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AA seq
476 aa
AA seq
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MVATNTQDTAESAAAAEPADSTAAPAVKKAAAKKAPAKKAAAKKVAAKKTPAKKATKAAA
KKAGAKKAAPKKAGEPGAEGAEGEEILDDESIELDDLGDIEIDEEDLEDEEIVDEAEDED
EVAAPAAAAETEEAEEADEPSAKDKASGDFVWDEEESEALRQARKDAELTASADSVRAYL
KQIGKVALLNAEEEVELAKRIEAGLYATEKLREFADKGEKLPVQSRRDLQWIMRDGNRAK
NHLLEANLRLVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIR
QAITRAMADQARTIRIPVHMVEVINKLGRIQRELLQDLGREPTPEELAKEMDITPEKVLE
IQQYAREPISLDQTIGDEGDSQLGDFIEDSEAVVAVDAVSFTLLQDQLQSVLETLSEREA
GVVRLRFGLTDGQPRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
gtggtagccacgaatacccaggacaccgccgaatcggccgcagccgccgaaccggcagac
agcaccgcagcaccggcggtcaagaaggcagccgccaagaaggctccggccaagaaggcc
gcggcgaagaaggtcgcggccaagaagaccccggccaagaaggcgaccaaggccgccgcc
aagaaggcgggggcgaagaaggccgcgccgaagaaggccggcgagcccggtgccgagggt
gccgagggcgaagagatcctcgacgacgagtcgatcgaactcgacgacctgggtgacatc
gagatcgacgaggaagacctcgaggacgaggagatcgtcgacgaggccgaggacgaggac
gaggtcgccgcgcccgccgccgccgccgagaccgaggaagccgaagaggccgacgagccg
tcggcgaaggacaaggcgtccggtgacttcgtctgggacgaagaggaatccgaggcgctg
cgtcaggcccgcaaggacgccgagctcaccgcttcggccgactcggtccgcgcctacctg
aagcagatcggtaaggtcgcgctgctcaacgccgaggaggaggtcgagctcgccaagcgc
atcgaggccggtctctacgccacggagaagctgcgcgagttcgccgacaagggcgagaag
ctgcccgtgcagtcccgccgcgacctgcagtggatcatgcgcgacggcaaccgcgccaag
aaccacctgctggaggccaacctccgcctcgtggtctcgctggccaagcgctacaccggc
cgcggcatggcgttcctggacctgatccaggaaggcaacctcggtctgatccgcgccgtc
gagaagttcgactacaccaagggctacaagttctcgacctacgcgacctggtggatccgt
caggccatcacccgcgccatggccgaccaggcccgcaccatccgcatcccggtgcacatg
gtcgaggtcatcaacaagctcggccgcatccagcgcgaactcctccaggacctgggccgc
gagcccacccccgaagagctcgccaaggaaatggacatcacgccggagaaggtgctggaa
atccagcagtacgcgcgtgaacccatctccctggaccagaccatcggtgacgaaggcgac
tcccagctcggtgacttcatcgaagactccgaagctgtcgtcgccgtcgacgcggtgtcc
ttcaccctgttgcaggaccagctccagtccgtcctcgaaacgctctccgagcgtgaggcc
ggcgtggtgcgcctccgtttcggcctgaccgacggccagccccgcaccctggacgaaatc
ggccaggtctacggcgtcacccgcgaacgcatccgccagatcgagtccaagaccatgtcg
aagctgcgccaccccagccgctcgcaggtcttgcgcgactacctggactag
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