KEGG   Nocardia tengchongensis: KHQ06_30565
Entry
KHQ06_30565       CDS       T07484                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
ntc  Nocardia tengchongensis
Brite
KEGG Orthology (KO) [BR:ntc00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    KHQ06_30565
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ntc03021]
    KHQ06_30565
Transcription machinery [BR:ntc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     KHQ06_30565
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HC2 HTH_20
Other DBs
NCBI-ProteinID: QVI20464
UniProt: A0ABX8CKG8
LinkDB
Position
6435847..6437277
AA seq 476 aa
MVATNTQDTAESAAAAEPADSTAAPAVKKAAAKKAPAKKAAAKKVAAKKTPAKKATKAAA
KKAGAKKAAPKKAGEPGAEGAEGEEILDDESIELDDLGDIEIDEEDLEDEEIVDEAEDED
EVAAPAAAAETEEAEEADEPSAKDKASGDFVWDEEESEALRQARKDAELTASADSVRAYL
KQIGKVALLNAEEEVELAKRIEAGLYATEKLREFADKGEKLPVQSRRDLQWIMRDGNRAK
NHLLEANLRLVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIR
QAITRAMADQARTIRIPVHMVEVINKLGRIQRELLQDLGREPTPEELAKEMDITPEKVLE
IQQYAREPISLDQTIGDEGDSQLGDFIEDSEAVVAVDAVSFTLLQDQLQSVLETLSEREA
GVVRLRFGLTDGQPRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq 1431 nt   +upstreamnt  +downstreamnt
gtggtagccacgaatacccaggacaccgccgaatcggccgcagccgccgaaccggcagac
agcaccgcagcaccggcggtcaagaaggcagccgccaagaaggctccggccaagaaggcc
gcggcgaagaaggtcgcggccaagaagaccccggccaagaaggcgaccaaggccgccgcc
aagaaggcgggggcgaagaaggccgcgccgaagaaggccggcgagcccggtgccgagggt
gccgagggcgaagagatcctcgacgacgagtcgatcgaactcgacgacctgggtgacatc
gagatcgacgaggaagacctcgaggacgaggagatcgtcgacgaggccgaggacgaggac
gaggtcgccgcgcccgccgccgccgccgagaccgaggaagccgaagaggccgacgagccg
tcggcgaaggacaaggcgtccggtgacttcgtctgggacgaagaggaatccgaggcgctg
cgtcaggcccgcaaggacgccgagctcaccgcttcggccgactcggtccgcgcctacctg
aagcagatcggtaaggtcgcgctgctcaacgccgaggaggaggtcgagctcgccaagcgc
atcgaggccggtctctacgccacggagaagctgcgcgagttcgccgacaagggcgagaag
ctgcccgtgcagtcccgccgcgacctgcagtggatcatgcgcgacggcaaccgcgccaag
aaccacctgctggaggccaacctccgcctcgtggtctcgctggccaagcgctacaccggc
cgcggcatggcgttcctggacctgatccaggaaggcaacctcggtctgatccgcgccgtc
gagaagttcgactacaccaagggctacaagttctcgacctacgcgacctggtggatccgt
caggccatcacccgcgccatggccgaccaggcccgcaccatccgcatcccggtgcacatg
gtcgaggtcatcaacaagctcggccgcatccagcgcgaactcctccaggacctgggccgc
gagcccacccccgaagagctcgccaaggaaatggacatcacgccggagaaggtgctggaa
atccagcagtacgcgcgtgaacccatctccctggaccagaccatcggtgacgaaggcgac
tcccagctcggtgacttcatcgaagactccgaagctgtcgtcgccgtcgacgcggtgtcc
ttcaccctgttgcaggaccagctccagtccgtcctcgaaacgctctccgagcgtgaggcc
ggcgtggtgcgcctccgtttcggcctgaccgacggccagccccgcaccctggacgaaatc
ggccaggtctacggcgtcacccgcgaacgcatccgccagatcgagtccaagaccatgtcg
aagctgcgccaccccagccgctcgcaggtcttgcgcgactacctggactag

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