Nocardia tengchongensis: KHQ06_32485
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Entry
KHQ06_32485 CDS
T07484
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ntc
Nocardia tengchongensis
Brite
KEGG Orthology (KO) [BR:
ntc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ntc03016
]
KHQ06_32485 (truB)
Enzymes [BR:
ntc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KHQ06_32485 (truB)
Transfer RNA biogenesis [BR:
ntc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KHQ06_32485 (truB)
Prokaryotic type
KHQ06_32485 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DUF2244
Motif
Other DBs
NCBI-ProteinID:
QVI25279
UniProt:
A0ABX8CZG1
LinkDB
All DBs
Position
complement(6830419..6831342)
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AA seq
307 aa
AA seq
DB search
MPPLVDAFGGLLIVDKEGGWTSHDVVAKSRRLLRTKKVGHAGTLDPMATGVLVLGVERAT
KLLGQLILTTKSYTATIRLGQSTITDDAEGEVTATTAAGHLTDADVAARVAELTGDIQQV
PATVSAIKVNGERAYARARAGEEVELAARPVTVSRFDILARRDIDTGDTHFVDLDVAVDC
SSGTYIRALARDLGEKLGVGGHLTALRRTAVGPFTLDHARTLDQVEAAAEAGEPVLNLDI
DAAVRTAFAVRDITETQANDLRNGRWLEPVGLPGVYAALDPTGHAIALLQESGKRASSVM
VVRPANL
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
ctgccgccgctggtcgatgccttcggcggtctgctgatcgtcgacaaggagggcggctgg
accagtcacgacgtggtcgccaagagccgaaggctgttgcgcaccaagaaggtcggccac
gccggcaccctcgacccgatggcgaccggcgtgctggtgctgggcgtggagcgcgccacc
aaactgctgggtcagctcatcctgaccaccaagtcgtacaccgccaccatccgtttgggt
cagtccaccatcaccgatgacgccgagggcgaggtcaccgcgaccaccgcggcaggccac
ctcaccgatgccgatgtcgccgcgcgcgtggccgaattgaccggcgacatccagcaggtc
cccgccaccgtcagcgccatcaaggtcaacggtgagcgcgcctacgcccgcgcccgcgcc
ggtgaggaggtggagctggccgctcgcccggtgacggtcagccgcttcgacatcctggcc
cgccgcgacatcgacaccggcgatacccatttcgtcgacctcgacgtggcggtggattgc
tcgtcgggcacctacatccgcgccctcgcccgtgacctcggcgaaaagctcggcgtcgga
ggccatctcaccgccctgcgccgaaccgcggtcggccccttcaccctcgatcacgcccgc
accctggaccaggtggaagcggcggccgaggccggtgaaccggtcctcaacctggacatc
gacgcggcagtccgcaccgccttcgcggtccgcgacatcaccgagacgcaggcgaacgat
ctccggaacggccgctggctcgaaccggtcggtctccccggcgtttacgcggccctggac
cccaccggtcacgccatcgccctgctccaggagtccggcaaacgcgcctcgtccgtcatg
gtcgtccgaccggccaacctctga
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