Nocardia tengchongensis: KHQ06_33890
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Entry
KHQ06_33890 CDS
T07484
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ntc
Nocardia tengchongensis
Pathway
ntc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ntc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KHQ06_33890 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ntc03400
]
KHQ06_33890 (mutM)
Enzymes [BR:
ntc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
KHQ06_33890 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KHQ06_33890 (mutM)
DNA repair and recombination proteins [BR:
ntc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KHQ06_33890 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
TackOD1
Gln_amidase_like
Motif
Other DBs
NCBI-ProteinID:
QVI20998
LinkDB
All DBs
Position
complement(7124960..7125817)
Genome browser
AA seq
285 aa
AA seq
DB search
MPELPEVEVVRRGLTEHVVGRVLDSVTVKHPRSVRRHAFGADDLVARLTGLRVQSAQRRG
KFLWLTFDEPDTSLVVHLGMSGQMLVQPAATPLEKHAHIIATLDDGNELRFVDQRTFGGW
QLSDLVEVDGTWVPESAAHIARDPLDPRFDAESVVKTLRAKQSEIKRLLLDQTVVSGVGN
IYADEALWRAKIHGERPAAKLTKPALHTLLAETRVVMDEALRAGGTSFDALYVNVNGQSG
YFERSLNAYGREHEPCRRCGAIMRREKFMNRSSFSCPRCQPRPHG
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacttcccgaggtcgaagtcgtccggcgcgggctcaccgagcatgtggtgggc
cgcgtcttggacagcgtgaccgtcaagcacccgcgttcggtgcggcggcacgcgttcggc
gccgacgatctcgtcgcccggctgaccggtctgcgcgtgcagagcgcgcagcggcggggc
aaattcctctggctcaccttcgatgagcccgatacctctctggtcgtgcatctcggcatg
tccgggcagatgctggtgcagcccgccgccaccccgctggagaagcacgcgcacatcatc
gccaccctcgacgacggcaacgaactgcgtttcgtcgatcagcgcaccttcggcggctgg
cagctctcggacctggtcgaggtggacggcacctgggtgccggaatccgccgcccacatc
gcccgcgaccccctggacccgcgcttcgacgccgagtccgtggtgaagaccttgcgcgcc
aagcaatccgagatcaaacgcctgctcctggaccagaccgtggtttcgggcgtcggcaac
atctacgccgacgaagccctgtggcgagccaagatccacggcgagcgccccgccgccaaa
ctcaccaagcccgccctgcacaccctccttgccgaaacccgggtcgtcatggacgaggcc
ctgcgcgccggcggcacctccttcgacgcgttgtacgtgaacgtcaacggtcagtccggc
tacttcgagcgctccctcaacgcctacggccgcgagcacgagccctgccgtcgctgcggc
gcgatcatgcgtcgggagaagttcatgaaccgttcgtccttctcctgcccccgctgtcag
ccccgcccgcacggctga
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