Nocardia tengchongensis: KHQ06_34090
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Entry
KHQ06_34090 CDS
T07484
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
ntc
Nocardia tengchongensis
Brite
KEGG Orthology (KO) [BR:
ntc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ntc03032
]
KHQ06_34090
03036 Chromosome and associated proteins [BR:
ntc03036
]
KHQ06_34090
03400 DNA repair and recombination proteins [BR:
ntc03400
]
KHQ06_34090
DNA replication proteins [BR:
ntc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KHQ06_34090
Chromosome and associated proteins [BR:
ntc03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
KHQ06_34090
DNA repair and recombination proteins [BR:
ntc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
KHQ06_34090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Mitofilin
Extensin_1
Motif
Other DBs
NCBI-ProteinID:
QVI21029
LinkDB
All DBs
Position
complement(7167428..7168072)
Genome browser
AA seq
214 aa
AA seq
DB search
MNKAELIDVLTEKLGTDRRTATAAVEQMVDTIVRAVNKGQSVTITGFGVFEQRKRAARVA
RNPRTGETVKVKPTSVPAFRPGAQFKAIIAGKQKIASSGPAVKRGVAAPVSGKAGAKKTT
AKKTAKKAATKAPAKTTAKKAASKAPAKKAAVKKTVAKKAAVKKTVAKKAPAKAAAVKKA
AVAKKVTASKATTAKKAAKKAPAKKTAAKRTARR
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggcggaactgatcgatgttctgaccgagaagttgggtactgacaggcgcacc
gctaccgctgcagtcgagcagatggtcgacacgatcgtgcgtgctgtgaacaaaggtcag
agcgtcaccatcacgggattcggtgtcttcgaacagcggaagcgcgcggctcgggttgct
cgtaacccgcgcaccggcgaaaccgtcaaggtgaagccgacttcggtcccggccttccgt
cccggcgcgcagttcaaggcgatcatcgcgggcaagcagaagatcgcctcgagcggcccg
gccgtgaagcgtggtgtggctgccccggtttcgggcaaggccggtgcgaagaagaccacc
gccaagaagacggcgaagaaggctgcgaccaaggctccggccaagaccaccgccaagaag
gcggcgtcgaaggctcccgccaagaaggccgccgtgaagaagacggtcgccaagaaggcc
gccgtgaagaagacggtcgccaagaaggctccggccaaggccgctgcggtcaagaaggcc
gcggttgccaagaaggtcaccgcttcgaaggccaccaccgccaagaaggcggccaagaag
gctcccgccaagaagaccgctgccaagcgcaccgcgcgccgttaa
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