Caenibius tardaugens: EGO55_00105
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Entry
EGO55_00105 CDS
T05741
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
ntd
Caenibius tardaugens
Pathway
ntd00020
Citrate cycle (TCA cycle)
ntd00190
Oxidative phosphorylation
ntd00650
Butanoate metabolism
ntd00720
Other carbon fixation pathways
ntd01100
Metabolic pathways
ntd01110
Biosynthesis of secondary metabolites
ntd01120
Microbial metabolism in diverse environments
ntd01200
Carbon metabolism
Module
ntd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ntd_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ntd_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
ntd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
EGO55_00105
00650 Butanoate metabolism
EGO55_00105
09102 Energy metabolism
00190 Oxidative phosphorylation
EGO55_00105
00720 Other carbon fixation pathways
EGO55_00105
Enzymes [BR:
ntd01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
EGO55_00105
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
Pyr_redox_2
DAO
Thi4
Motif
Other DBs
NCBI-ProteinID:
AZI34535
UniProt:
U2ZRN8
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Position
complement(20363..22198)
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AA seq
611 aa
AA seq
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MASASTQAAYKIIDHTYDTVVVGAGGSGLRATMGSAEAGLKTACITKVFPTRSHTVAAQG
GIAASLGNNSPDHWTWHMYDTVKGSDWLGDQDAIEYMVREAPQAVYELEHAGVPFSRNAD
GTIYQRPFGGHMQNMGEGPPVQRTCAAADRTGHAMLHALYQQSLKYDADFFIEYFAIDLI
MENGPDGVPVCRGVIAMCMDDGSIHRFRSHAVVLATGGYGRSYFTATSAHTCTGDGGGMV
LRAGLPMQDMEFVQFHPTGIYGAGVLITEGARGEGGYLTNSEGERFMERYAPSAKDLASR
DVVSRSMAMEIREGRGVGPHKDHIYLHLDHIDPKVLAERLPGITESGKIFAGVDLARQPL
PVVPTVHYNMGGIPCNYHGEVVTIGADGNPETVVPGLFAVGEAACVSVHGANRLGSNSLI
DLVVFGRATGHRLKELIKPGTAHNGLPKDSADLALGRLDHFRNAKGGSPTAEVRTEMQRT
MSAHAAVFRTDELMAEGVTKLADTYKRMQDIHVSDRSLIWNSDLIETLELDNLISQASVT
MSGAYARKESRGAHAHEDFPNRDDANWMKHTVGWFNGWGGKGGEVKLDYRPVHEFTLTDD
VQYIKPKARVY
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgcatctactcaggccgcatacaagattatcgatcacacctatgatacggtg
gttgtcggcgctggcggctctggtctgcgcgctacgatgggttcggctgaagccggtctg
aaaaccgcctgcatcaccaaggtgttcccgacccgttcgcataccgtggcggcgcagggt
ggtattgccgcgtcgctcggcaacaactcgccggaccactggacctggcacatgtacgac
accgtgaaggggtcggactggctgggcgatcaggacgcgatcgaatacatggtgcgcgaa
gcgccgcaggcggtttacgagcttgaacatgccggtgtgccgttcagccgcaacgccgat
ggcacgatttaccagcgcccgttcggcggtcacatgcagaatatgggggaaggcccgccg
gtgcagcgcacttgtgctgccgccgaccgtaccggccacgccatgctgcacgcgctttat
cagcagtcgctgaagtacgatgcagacttcttcatcgaatacttcgcgatcgacctgatc
atggaaaacggccctgatggcgttccggtctgccgtggcgtgatcgccatgtgcatggac
gatggttcgatccaccgtttccgcagccacgccgttgtgctcgccactggcggatacgga
cgcagctatttcaccgcgacctcggcccacacctgcaccggcgacggtggcgggatggta
ctgcgcgcgggcctgccgatgcaggacatggaattcgtgcagttccaccctacggggatt
tacggtgcgggcgtgttgatcaccgaaggcgcgcgcggcgaaggtggttatctcaccaac
tccgagggtgagcgttttatggaacgctatgcgccgtcggccaaggatctcgccagccgc
gacgttgtgtcgcgttcgatggcgatggaaatccgcgaaggtcgcggtgtaggcccgcac
aaggaccatatctaccttcacctcgatcatatcgatcccaaggtgctggcagaacgtctg
cccggcattaccgaaagcggcaagattttcgctggcgtggatctggcccgccagcctttg
cccgtggttccgactgtgcattacaacatgggcggtatcccctgtaactatcacggcgaa
gtcgtcaccatcggtgccgatgggaacccggaaacggttgtgccgggtctgttcgctgtg
ggcgaagccgcctgcgtgtccgtccacggtgcaaaccgtctcggatcgaactccctgatc
gatctcgtggtgttcggccgtgcgaccggccatcgcctgaaggaactgatcaagccgggc
acggcccacaacggtctacccaaggattcggccgatctggcgctgggccgcctcgatcac
ttccgcaatgccaaggggggttctcccaccgcggaagtccgcaccgaaatgcagcgtacc
atgtcggcccatgccgctgtgttccgcacggatgaactgatggccgaaggcgtgaccaag
ctggccgatacctacaagcgcatgcaggacattcacgtgtctgaccgttcgctgatctgg
aattcggacctgatcgaaacgctggaactcgataacctgatctcgcaggccagcgtcacg
atgagcggcgcctacgcccgcaaggaaagccgcggcgcccatgcgcacgaggatttcccg
aaccgtgacgatgccaactggatgaagcacaccgttggctggttcaacggatggggcggc
aagggcggcgaggtgaagctcgattaccgtccggtccacgaattcacgctgaccgacgat
gttcagtacatcaagcccaaggcccgcgtatattga
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