Caenibius tardaugens: EGO55_00435
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Entry
EGO55_00435 CDS
T05741
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ntd
Caenibius tardaugens
Pathway
ntd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ntd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EGO55_00435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ntd03400
]
EGO55_00435
Enzymes [BR:
ntd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EGO55_00435
DNA repair and recombination proteins [BR:
ntd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EGO55_00435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
DEAD
PriA_3primeBD
ResIII
PriA_CRR
Helicase_C
AAA_30
zinc-ribbons_6
AAA_19
AAA_22
HTH_17
AAA_16
MerR_1
PIF1
SLFN-g3_helicase
DAP3
Motif
Other DBs
NCBI-ProteinID:
AZI34594
UniProt:
U2YIE1
LinkDB
All DBs
Position
86142..88307
Genome browser
AA seq
721 aa
AA seq
DB search
MNRVRLLVLNAALGPLDYRVPDGMVVKPGSVVRAPLGPREIFGIVWDEGRLDANSVPDSK
LRPIFGVLPVPPLPDELRRLVEWTADYYCASPAAVARMVLSSGGALKGPATMTEYRLSGA
EPERMTAQREQAMDRLQGEQATLRELAALTGVSEGVLRGLVNQGVLEPVAVDCDRPFPRA
DSLYAVPVLNPEQQAVADRFIAAVSDGGFTPFLLDGVTGSGKTEVYFEAMAAALERGKQV
LVLLPEIALTEAFLKRFEDRFGAAPVTWHSSLKSTERRRAWRAIASGEAQVVVGARSALF
LPYAKLGLIVVDEAHEISFKQDDGVRYNARDVAIMRGRFAKIPVVLASATPALESLQMAE
SGVYQRVELSARYGGAQLPAISVVDLRNDPPPRGRWLAPKLVEQLELRAERGEQSLLFLN
RRGYAPLTLCRHCGYRFQCPNCSAWLVEHRFSQRLACHHCGHETPPPPACPECGTQDCLV
ACGPGVERIADEVAELLPEARVAVATSDTLNTPERASDFIAMAQAKQIDVIVGTQLVTKG
FHFPELTLVGVVDADLGLEGGDLRAAERTYQQIAQVAGRAGRGTKPGEVLIQTRHPDAPV
ITALAAGDRDAFYAAETEARREAGAPPFGRWAAIIVSSEDEAEARDAARAIGGKRPELPD
IAILGPAPAPLALLRGRYRYRLLVNARRTAQLQDVIREWLGAFQLPNSIRVSVDIDPYSF
V
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcgtccgccttcttgtcctcaacgccgcacttggtccgctcgattatcgtgtg
cccgatggcatggttgtcaagccgggctcggtcgtccgcgcgccactcggccctcgtgaa
atcttcggcattgtctgggatgagggacggctggatgccaactcggttcccgacagcaaa
ttgcgcccgattttcggtgtgctgcccgtaccacccctgcccgacgaattgcggcggctg
gtggaatggactgcggattattactgcgccagcccggcagcggtggcgcgcatggtcctg
tcgagcggtggggcgctgaaaggccccgcgacaatgaccgaatatcgcctgtcgggcgcg
gagcccgaacggatgaccgcgcaacgcgaacaggcgatggaccggttgcagggggaacag
gccaccttgcgggaattggcagcgctgaccggtgtgtccgaaggggtcttgcgcggtctg
gtcaatcagggtgttctggaacccgttgcggtcgattgcgatcgccctttcccccgggcc
gattccctctatgccgtgcccgtgctgaaccctgaacagcaagcggtggcggatcgtttt
atcgcggcagtttcggacggagggttcacgccgttcctgctcgacggagtgaccggttcg
ggcaagaccgaagtctatttcgaagccatggccgctgcgctcgaacgcggcaaacaggtt
ctggtgctgctgcccgaaatcgccctgacagaagcctttctcaaacggtttgaggatcgc
ttcggcgcggccccggtcacgtggcattcctcgctcaaatcgaccgagcgccgccgcgcc
tggcgcgccattgccagtggcgaggcccaagtcgtggtgggggcacgctctgccctgttc
ctgccatacgccaagcttggcctgatcgtcgtcgacgaagcgcacgagatcagtttcaag
caggatgacggcgtgcgttacaacgcccgcgatgtggcgatcatgcgcgggcggtttgca
aaaatcccggtggtgctggccagtgccacccccgcgctggaaagcctgcaaatggcggaa
agcggcgtttatcagcgggtcgaactctccgcccgctatggcggcgcgcaattgcccgcc
atttcggtggtcgacctgcgcaatgatccgccgccgcgcggccggtggctcgccccaaag
ctggtcgaacaactcgaactgcgtgccgaacgcggcgaacaatcgctgctgttcctcaac
cggcgcggatacgcaccgctcaccctgtgccgccactgcgggtatcgtttccagtgcccc
aattgcagcgcctggctggtcgaacatcgcttctcgcagcggctggcgtgccaccattgc
ggccatgaaaccccgcccccgcccgcctgccccgaatgcggcacacaggattgtctggtc
gcctgcggtccgggtgtcgaacggatcgcggatgaagtggccgaactgctgcccgaagca
cgcgttgccgtggccacgtccgatacgctcaacacgcccgaacgggcatcggatttcatc
gccatggcccaagcgaagcagatcgacgtgattgtcggcacgcaactggtgacgaaaggc
ttccacttccccgaactgacgctcgtgggcgtggtcgatgccgatcttggccttgaaggt
ggggatctgcgcgccgccgaacggacctatcaacagatcgcacaggtggcgggccgcgcc
gggcgcggaaccaagccgggcgaagtgctgatccagacaaggcaccccgatgcccccgtg
atcaccgcgctggccgcgggcgatcgcgatgccttctatgccgcggaaacggaggcgcgg
cgggaagcaggtgcgccacctttcggccgctgggccgcgattatcgtgtcgagcgaggat
gaagccgaagcccgcgatgccgcgcgagcgattggcggcaaacggcccgaattacccgac
atcgccattctcggcccggcgcccgcacctctggctctgcttcgcggacggtatcgttat
cgtctgctggtcaacgcccggcgcaccgcgcaattgcaggatgtcatccgcgaatggctg
ggcgccttccagttgcccaacagcatccgggtaagcgtggatatcgatccctacagcttc
gtctag
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