KEGG   Caenibius tardaugens: EGO55_08085
Entry
EGO55_08085       CDS       T05741                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
ntd  Caenibius tardaugens
Brite
KEGG Orthology (KO) [BR:ntd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ntd03400]
    EGO55_08085
Enzymes [BR:ntd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     EGO55_08085
    5.6.2.6  RNA 3'-5' helicase
     EGO55_08085
DNA repair and recombination proteins [BR:ntd03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    EGO55_08085
SSDB
Motif
Pfam: WHD_Lhr DEAD_assoc DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: AZI35922
UniProt: U3A2P6
LinkDB
Position
complement(1773933..1776380)
AA seq 815 aa
MNSALPLEIAGWFAGRGWHVRDHQQRMYDAARAGHHALLAADTGSGKTLAGFLPTLADFC
PSLLGGKAPPEGLHTLYVSPLKALAHDVRRNLLAPIEEIGLPIRVETRSGDTPADRKKRQ
RSRPPHVLLTTPESLSLLLSYPESRELFATLRRVVVDEVHAFATGKRGDLLALALARIHG
IAPAAQRVALSATLSDPEGFRAWLAPTDDTRSVLLVEGEKGVEPDLAILVPQEERVPWGG
HAGRWAIPRIMDEIRRNRTTLIFTNTRFLAEYVFQMLWAVNDGNLPIGIHHGSLATEARR
KVEGAMARGELRGLVCTSSLDLGVDWGDIDCVIQMGAPKGSSRLLQRIGRSNHRLDQPSR
ALLVPGNRFEFLEAMAACDAVHAGQRDGEAFRPGTLDVLAQHIMACACSGPFQEAALLAE
VRTATAYRWIDAQIWQRVLHFVATGGYALEAYDRFRRIVRDRAGVWRLTHPEHAVRHRLN
AGIIVDSEMLQVRFGNGRALGKVEERFAATLSPGDTFYFAGLSLEVERIKDMDVIVRAAK
TSAMIPSYGGQRMPLTTHLAARVQAMLSDRAGWGRFPDDVREWLEMQDWRSAMPGPGKLL
VESFPHNGLHYTVYYTFEGWNANQSLGMLITRRMEDRGLMPGGFVANDYSLAVWGLKPVD
NPLQLLSPDILTDEFVAWVQDSYLLRRAFREVAVIGGLVERQHPGQRKSGRQVTFSTDLI
YDVLRKHEPGHVLIEAAWADARSRLTDVARLAGVLERAGRELVHVMLDRVSPLAVPVMVM
IGREAVPQGAVDDDLLLEAEGLAAAAMRADPPLED
NT seq 2448 nt   +upstreamnt  +downstreamnt
atgaactctgcgctgccccttgagattgcgggctggttcgccgggcgcggctggcatgtg
cgcgatcatcaacagcgcatgtacgatgccgcgcgggcgggccaccatgccctgctggcg
gcggataccggatcgggcaagacattggcggggttcctgcccacgctggcggatttctgc
ccttcgctgcttgggggtaaggcgccgcccgaagggctgcatacgctctatgtttcgccg
ctgaaggcgttggcgcacgatgtgcggcgcaatctgctcgccccgatcgaggagatcggc
ttgccgatccgggtcgagacgcgcagcggcgatacccctgccgaccggaagaagcgccag
cgcagccgcccgccgcacgtgctgctgaccacaccggaaagcctgtcgctcttgctcagc
tatccggaaagccgggaactgttcgccacgctgcgccgcgttgtggtggatgaagtgcat
gctttcgccactggcaagcggggtgatcttctggcgctggcgctggcccggattcacggc
atagcccctgcggcgcagcgggtggcgctttcggccacgctgtccgatccggaaggcttc
cgcgcatggttggctcccactgacgacacccgttctgtcctgctggtagagggggaaaag
ggggtggaaccggatctcgccattcttgtcccgcaggaagagcgcgtgccgtggggcggc
catgcagggcgctgggcgattccacggatcatggacgaaatccgccggaaccggaccacg
ctgatcttcaccaacacccggtttctggcagaatatgtgttccagatgctgtgggcggtg
aacgacggcaatcttcctattggcatccaccatggatcgctggcgacagaggcgcgacgc
aaggtcgaaggggccatggcgcggggtgaactgcgggggctggtgtgtacctccagcctc
gatctcggggtcgactggggcgatatcgactgcgtgatccagatgggcgcgcccaaggga
tcgtcgcgcctgttgcagcggatcggccgttccaatcaccggctggaccagcccagcagg
gccttgctggtgccgggcaaccggttcgagtttctcgaagcgatggccgcatgcgatgcc
gtgcacgcagggcagcgcgatggcgaggcattccggcccggcacgctcgatgtgctggcg
cagcatatcatggcctgcgcctgttccggcccgtttcaggaggctgcgctgctggccgaa
gtgcgcaccgccaccgcctatcgctggatcgatgcgcaaatctggcagcgcgtgctgcat
tttgtggccacgggtggctacgcgctggaagcctatgaccgttttcgcaggatcgtgcgc
gatcgcgcaggggtgtggcggctgacccatcccgaacatgccgtgcggcatcgcctgaac
gcggggatcatcgtcgattcggaaatgctgcaggtccgttttggtaatggccgcgcgctg
ggcaaggtggaagaacgctttgccgccacgctgtcaccaggcgatacgttctactttgcc
gggttgagccttgaggtggagcggatcaaggacatggatgtgattgtccgggccgcgaaa
acttccgcgatgatcccgtcctatggcgggcagcgcatgcccctgacaacgcatctggcc
gcgcgggtgcaggccatgttgtccgaccgcgccgggtggggccggttccccgatgatgtg
cgggaatggctggaaatgcaggactggcgcagcgccatgcccgggccgggcaagctgctg
gtggaaagcttcccgcacaacgggttgcactacacggtctactataccttcgaaggatgg
aacgcgaaccagtcgctcgggatgctgatcacgcggcggatggaagatcgcgggctgatg
ccgggtggtttcgttgccaatgattacagtctggccgtctggggcctgaagccggtcgac
aatccgctgcagctcctgtcaccggacattcttaccgatgaatttgtcgcctgggtgcag
gattcgtatcttttgcgccgtgcttttcgcgaagtggctgtgattggcggactggtggaa
cggcagcatccgggccagcgcaagagcgggcgacaggtcacgttctcgacggacctgatc
tacgatgtgctgcgcaaacatgaacctgggcatgtgctgattgaagccgcctgggccgat
gcccgcagccgcttgaccgatgtggcccgtctggccggggtgctcgaacgggcgggccgc
gaactggtccatgtcatgttggatcgggtcagcccgctggccgtccctgtcatggttatg
atcgggcgcgaggccgtgccgcaaggtgcggtggatgacgatctcctgctggaggccgaa
gggctggccgcagctgcgatgcgcgccgatccgccgcttgaggattga

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